Bradbury PJ, Zhang Z, Kroon DE, Casstevens TM, Ramdoss Y, Buckler ES (2007) TASSEL: software for association mapping of complex traits in diverse samples. Bioinformatics 23:2633–2635
Article
CAS
Google Scholar
Chen W, Cui P, Sun H, Guo W, Yang C, Jin H, Fang B, Shi D (2009) Comparative effects of salt and alkali stresses on organic acid accumulation and ionic balance of seabuckthorn (Hippophae rhamnoides L.). Ind Crop Prod 30:351–335
Article
Google Scholar
Cheng H, Jiang H, Xue D, Guo L, Zeng D, Zhang G, Qian Q (2008) Mapping of QTL underlying tolerance to alkali at germination and early seedling stages in rice. Acta Agron Sin 34:1719–1727
Article
CAS
Google Scholar
Cheng S, Cao L, Zhuang J, Chen S, Zhan X, Fan Y, Zhu D, Min S (2007) Super hybrid Rice breeding in China: achievements and prospects. J Integr Plant Biol 49:805–810
Article
CAS
Google Scholar
Do T, Chen H, Hien V, Hamwieh A, Yamada T, Sato T, Yan Y, Cong H, Shono M, Suenaga K (2016) Ncl synchronously regulates Na+, K+, and cl− in soybean and greatly increases the grain yield in saline field conditions. Sci Rep 6:19147
Article
CAS
Google Scholar
Dreher K, Callis J (2007) Ubiquitin, hormones and biotic stress in plants. Ann Bot 99:787–822
Article
CAS
Google Scholar
Famoso A, Zhao K, Clark R, Tung C-W, Wright M, Bustamante C, Kochian L, McCouch S (2011) Genetic architecture of aluminum tolerance in Rice (Oryza sativa) determined through genome-wide association analysis and QTL mapping. PLoS Genet 7:e1002221
Article
CAS
Google Scholar
Francois L, Maas E, Donovan T, Youngs V (1986) Effect of salinity on grain yield and quality, vegetative growth, and germination of semi-dwarf and durum Wheat1. Agron J 78:1053
Article
CAS
Google Scholar
Gagne J, Downes B, Shiu S, Durski A, Vierstra R (2002) The F-box subunit of the SCF E3 complex is encoded by a diverse superfamily of genes in Arabidopsis. Proc Natl Acad Sci U S A 99:11519–11524
Article
CAS
Google Scholar
Guo M, Wang R, Wang J, Hua K, Wang Y, Liu X, Yao S (2014) ALT1, a Snf2 family chromatin remodeling ATPase, negatively regulates alkaline tolerance through enhanced defense against oxidative stress in Rice. PLoS One 9:e112515
Article
Google Scholar
Huang X, Chao D, Gao J, Zhu M, Shi M, Lin H (2009) A previously unknown zinc finger protein, DST, regulates drought and salt tolerance in rice via stomatal aperture control. Genes Dev 23:1805–1817
Article
CAS
Google Scholar
Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi A, Khurana J (2007) F-box proteins in Rice. Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress. Plant Physiol 143:1467–1483
Article
CAS
Google Scholar
Kreszies T, Schreiber L, Ranathunge K (2018) Suberized transport barriers in Arabidopsis, barley and rice roots: from the model plant to crop species. J Plant Physiol 227:75–83
Article
CAS
Google Scholar
Kumar V, Singh A, Mithra S, Krishnamurthy S, Parida S, Jain S, Tiwari K, Kumar P, Rao A, Sharma S (2015) Genome-wide association mapping of salinity tolerance in rice (Oryza sativa). DNA Res 22:133–145
Article
CAS
Google Scholar
Lechner E, Achard P, Vansiri A, Potuschak T, Genschik P (2006) F-box proteins everywhere. Curr Opin Plant Biol 9:631–638
Article
CAS
Google Scholar
Li J, Pu L, Han M, Zhu M, Zhang R, Xiang Y (2014) Soil salinization research in China: advances and prospects. J Geogr Sci 24:943–960
Article
Google Scholar
Li N, Sun J, Wang J, Liu H, Zheng H, Yang L, Liang Y, Li X and Zou D (2017) QTL analysis for alkaline tolerance of rice and verification of a major QTL. Plant Breeding 136(6): 881-891.
Li N, Zheng H, Cui J, Wang J, Liu H, Sun J, Liu T, Zhao H, Lai Y, Zou D (2019) Genome-wide association study and candidate gene analysis of alkalinity tolerance in japonica rice germplasm at the seedling stage. Rice 12:24
Article
Google Scholar
Liang J, Qu Y, Yang C, Ma X, Cao G, Zhao Z, Zhang S, Zhang T, Han L (2015) Identification of QTLs associated with salt or alkaline tolerance at the seedling stage in rice under salt or alkaline stress. Euphytica 201:441–452
Article
CAS
Google Scholar
Liang Y, Sun J, Suo Y, Liu H, Wang J, Zheng H, Sun X, Zou D and University, N.A., (2017) QTL Mapping and QTL × Environment Interaction Analysis of Salt and Alkali Tolerance-Related Traits in Rice(Oryza sativa L.). Scientia Agricultura Sinica, 50(10): 1747-1762.
Liu E, Liu Y, Wu G, Zeng S, Thi T, Liang J, Liang Y, Dong Z, She D, Wang H, Zaid I and Hong D (2016) Identification of a Candidate Gene for Panicle Length in Rice (Oryza sativa L.) Via Association and Linkage Analysis. Frontiers in Plant Science 7, 596-596.
Livak K and Schmittgen T (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2-△△method. Methods 25:402–408
Qadir M, Quillerou E, Nangia V, Murtaza G, Singh M, Thomas R, Drechsel P, Noble A (2014) Economics of salt-induced land degradation and restoration. Nat Res Forum 38:282–295
Article
Google Scholar
Qi D, Guo G, Lee M, Zhang J, Cao G, Zhang S, Suh S, Zhou Q, Han L (2008) Identification of quantitative trait loci for the dead leaf rate and the seedling dead rate under alkaline stress in rice. J Genet Genomics 35:299–305
Article
Google Scholar
Ren Z, Gao J, Li L, Cai X, Huang W, Chao D, Zhu M, Wang Z, Luan S, Lin H (2005) A rice quantitative trait locus for salt tolerance encodes a sodium transporter. Nat Genet 37:1141–1146
Article
CAS
Google Scholar
Sabouri H, Sabouri A (2008) New evidence of QTLs attributed to salinity tolerance in rice. Afr J Biotechnol 7:4376–4383
CAS
Google Scholar
Shakiba E, Edwards J, Jodari F, Duke S, Eizenga G (2017) Genetic architecture of cold tolerance in rice (Oryza sativa) determined through high resolution genome-wide analysis. PLoS One 12:e0172133
Article
Google Scholar
Shi Y, Gao L, Wu Z, Zhang X, Wang M, Zhang C, Zhang F, Zhou Y, Li Z (2017) Genome-wide association study of salt tolerance at the seed germination stage in rice. BMC Plant Biol 17:92
Article
Google Scholar
Sun J, Zou D, Luan F, Zhao H, Wang J, Liu H, Xie D, Su D, Ma J, Liu Z (2014) Dynamic QTL analysis of the Na+ content, K+ content, and Na+/K+ ratio in rice roots during the field growth under salt stress. Biol Plant 58:689–696
Article
CAS
Google Scholar
Thomson M, de Ocampo M, Egdane J, Rahman M, Sajise A, Adorada D, Tumimbang-Raiz E, Blumwald E, Seraj Z, Singh R, Gregorio G and Ismail A (2010) Characterizing the Saltol quantitative trait locus for salinity tolerance in Rice. Rice 3, 148–160
Wang Z, Chen Z, Cheng J, Lai Y, Wang J, Bao Y, Huang J, Zhang H (2012a) QTL analysis of Na+ and K+ concentrations in roots and shoots under different levels of NaCl stress in rice (Oryza sativa L.). PLoS One 7:e51202
Article
CAS
Google Scholar
Wang Z, Cheng J, Chen Z, Huang J, Bao Y, Wang J, Zhang H (2012b) Identification of QTLs with main, epistatic and QTL x environment interaction effects for salt tolerance in rice seedlings under different salinity conditions. Theor Appl Genet 125:807–815
Article
CAS
Google Scholar
Wang Z, Wang J, Bao Y, Wu Y, Zhang H (2011) Quantitative trait loci controlling rice seed germination under salt stress. Euphytica 178:297–307
Article
Google Scholar
Yan Y, Chen X, Yang K, Sun Z, Fu Y, Zhang Y, Fang R (2011) Overexpression of an F-box protein gene reduces abiotic stress tolerance and promotes root growth in rice. Mol Plant 4:190–197
Article
CAS
Google Scholar
Zang J, Sun Y, Wang Y, Yang J, Li F, Zhou Y, Zhu L, Jessica R, Mohammadhosein F, Xu J, Li Z (2008) Dissection of genetic overlap of salt tolerance QTLs at the seedling and tillering stages using backcross introgression lines in rice. Sci In China Series C-Life Sci 51:583–591
Article
Google Scholar
Zhang Y, Lin X, Ou X, Hu L, Wang J, Yang C, Wang S, Liu B (2013) Transcriptome alteration in a rice introgression line with enhanced alkali tolerance. Plant Physiol Biochem 68:111–117
Article
CAS
Google Scholar
Zhang Y, Xu W, Li Z, Deng X, Wu W, Xue Y (2008) F-box protein DOR functions as a novel inhibitory factor for Abscisic acid-induced Stomatal closure under drought stress in Arabidopsis. Plant Physiol 148:2121–2133
Article
CAS
Google Scholar
Zheng H, Zhao H, Liu H, Wang J, Zou D (2015) QTL analysis of Na+ and K+ concentrations in shoots and roots under NaCl stress based on linkage and association analysis injaponicarice. Euphytica 201:109–121
Article
CAS
Google Scholar
Zhu J (2001) Plant salt tolerance. Trends Plant Sci 6:66–71
Article
CAS
Google Scholar