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Fig. 3 | Rice

Fig. 3

From: Constructed Rice Tracers Identify the Major Virulent Transcription Activator-Like Effectors of the Bacterial Leaf Blight Pathogen

Fig. 3

TALE diversity in Xoo strains. A Predicted major virulence TALEs in the genomes of representative Xoo strains from six races. AnnoTALE software was used for TALE prediction. The genomic sequences of PXO99A (race 1), IXO221 (race 2), LN18 (race 4), PXO86 (race 5) and PXO61 (race 6) were obtained from NCBI, and the genomic sequence of JS137-1 (race 3) was generated in our laboratory (unpublished data). B Alignment of PthXo1, PthXo3 and PthXo2 in TALE RVD sequences (no gaps allowed) with the DNAsequence of EBEs in the OsSWEET11, OsSWEET13 and OsSWEET14 promoters. Background colors indicate the quality of the match between the RVDs and the EBE nucleotides (http://bioinfo-web.mpl.ird.fr/cgi-bin2/talvez/talvez.cgi)

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