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Rice

Table 3 Ranking of BC3F4 lines for the RPGR% as indicated by the GBS results (% SNP donor) and comparison with performances of the 96 KASP markers panel

From: Marker-Assisted Introgression of the Salinity Tolerance Locus Saltol in Temperate Japonica Rice

ID_GBS

% SNP donor*

% SNP recurrent

% bp from donor not detected by KASP markers

O2

1.06

98.94

1.04

VN1

1.03

98.97

1.03

VN8

1.85

98.15

1.11

O1

2.14

97.86

1.80

O5

2.57

97.43

1.50

O6

2.57

97.43

1.49

O10

2.94

97.06

0.44

O11

3.01

96.99

0.50

O8

3.21

96.79

0.70

O12

3.19

96.81

0.69

O9

3.17

96.83

0.67

VN4

3.14

96.86

0.00

O13

3.55

96.45

2.76

VN10

3.74

96.26

1.39

O4

3.91

96.09

2.83

VN12

3.78

96.22

0.56

VN7

4.61

95.39

2.26

VN9

4.56

95.44

2.21

VN11

4.16

95.84

0.48

VN2

4.16

95.84

1.35

VN3

4.16

95.84

1.36

VN6

4.73

95.27

1.60

VN5

4.73

95.27

1.59

O3

5.12

94.88

0.84

O7

6.34

93.66

2.06

O14

6.64

93.36

2.37

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