QTL | Marker | Position on NIP genome | Marker type | MAF | P-value | FDR | Phenotype contribution | Co-location gene | Â |
---|---|---|---|---|---|---|---|---|---|
PBR | Â | Â | Â | Â | Â | Â | Â | Â | |
qPBR1 | Chr1_9116925 | 8,118,681 | SNP | 0.22 | 1.15E-07 | 5.97E-02 | 5.10 | Â | Â |
qPBR2 | Chr2_37198859 | 33,002,918 | SNP | 0.12 | 7.16E-08 | 5.97E-02 | 5.27 | Â | Â |
qPBR3 | Chr3_37987685 | 32,981,449 | SNP | 0.32 | 1.24E-07 | 5.97E-02 | 5.07 | Â | Â |
qPBR12 | Chr12_12599463 | 10,798,977 | SNP | 0.14 | 2.08E-07 | 5.97E-02 | 4.88 | Ptr | Â |
Chr12_12637980 | 10,833,939 | PAV | 0.22 | 4.45E-07 | 1.59E-01 | 4.56 | Â | ||
LBR | Â | Â | Â | Â | Â | Â | Â | Â | |
qLBR1 | Chr1_9115897 | 8,117,653 | SNP | 0.22 | 1.06E-09 | 1.72E-04 | 6.87 | Â | Â |
qLBR2a | Chr2_24921088 | 21,953,715 | SNP | 0.19 | 3.34E-08 | 2.80E-04 | 5.58 | Pid1 | Â |
qLBR2b | Chr2_37198859 | 33,002,918 | SNP | 0.12 | 5.43E-09 | 1.72E-04 | 6.26 | Â | Â |
qLBR3a | Chr3_20356924 | 18,120,630 | SNP | 0.22 | 1.05E-08 | 1.78E-04 | 6.01 | Â | Â |
qLBR3b | Chr3_37987664 | 32,981,428 | SNP | 0.22 | 1.24E-10 | 1.72E-04 | 7.69 | Â | Â |
qLBR4a | Chr4_5270980 | 4,054,328 | PAV | 0.34 | 1.24E-07 | 1.12E-03 | 5.25 | Â | Â |
qLBR4b | Chr4_8785383 | 6,618,386 | SNP | 0.20 | 1.17E-07 | 7.14E-04 | 5.12 | Â | Â |
qLBR4c | Chr4_16027200 | 12,470,034 | PAV | 0.23 | 8.67E-07 | 6.23E-03 | 4.52 | Â | Â |
qLBR6a | Chr6_27624040 | 23,022,166 | PAV | 0.12 | 2.32E-07 | 1.94E-03 | 5.02 | Â | Â |
qLBR6b | Chr6_30626962 | 25,619,840 | SNP | 0.39 | 3.53E-07 | 1.84E-03 | 4.72 | Â | Â |
qLBR7a | Chr7_12449656 | 11,050,922 | SNP | 0.20 | 4.38E-08 | 3.34E-04 | 5.49 | Â | Â |
qLBR7b | Chr7_16306460 | 14,422,872 | PAV | 0.50 | 3.76E-08 | 4.04E-04 | 5.70 | Â | Â |
qLBR9 | Chr9_4512315 | 3,546,374 | SNP | 0.22 | 1.09E-09 | 1.72E-04 | 6.86 | Â | Â |
qLBR10 | Chr10_10257687 | 8,056,337 | SNP | 0.24 | 1.06E-09 | 1.72E-04 | 6.87 | Â | Â |
qLBR11a | Chr11_1397560 | 1,286,775 | PAV | 0.21 | 8.74E-10 | 8.26E-05 | 7.14 | Â | Â |
qLBR11b | Chr11_23163296 | 19,007,058 | SNP | 0.20 | 1.16E-08 | 1.78E-04 | 5.97 | Â | Â |
qLBR12a | Chr12_12645340 | 10,841,299 | PAV | 0.23 | 5.75E-11 | 8.26E-05 | 8.21 | Ptr | Â |
Chr12_12653788 | 10,849,747 | SNP | 0.22 | 1.23E-09 | 1.72E-04 | 6.82 | Â | ||
qLBR12b | Chr12_16714680 | 13,838,432 | PAV | 0.28 | 1.35E-08 | 1.89E-04 | 6.09 | Â | Â |