Fig. 4
From: Long Non-coding RNAs Responsive to Blast Fungus Infection in Rice
Co-expression analysis blast fungus-responsive genes and LncRNAs and GO enrichments of genes associated with LncRNAs. a Weighted correlation network analysis (WGCNA) of deferentially expressed (DE) LncRNAs and mRNAs. For DE-genes, we used the cutoff: foldchange > 2, Adjust p value < 0.05. Colors represent modules generated by WGCNA. b Network of module turquoise on the basis of WGCNA analysis. We used the cutoff: weight > 0.4. c Gene Ontology (GO) enrichment analysis of genes selected in (b). The size of character represents the significance of the GO; Color of the bubble represents GO group. d Network plot of correlation between four DE-LncRNAs and known pathogen resistance-related genes. The information of these blast pathogen resistance-related genes were listed in Table S3