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Table 10 Locations and characteristics of QTLs detected for other relative traits (including SL-R, RL-R, RFW-R and RDW-R)

From: Genome-Wide Association Study (GWAS) to Identify Salt-Tolerance QTLs Carrying Novel Candidate Genes in Rice During Early Vegetative Stage

QTL

Chromosome

No. of Associated SNPs

Position/interval (Mbp)

-Log10(p)

r2

qSL-R2.1

2

5

30.42–30.55

4.0–5.3

11.11–12.93

qSL-R8.1

8

4

14.06–14.99

4.0–6.0

9.37–16.04

qRL-R2.1

2

2

34.98–35.01

4.1–5.5

9.73–13.07

qRL-R7.1

7

1

19.83

5.5

16.46

qRL-R9.1

9

2

16.29–16.41

4.0–4.1

9.15–9.50

qRFW-R1.1

1

7

22.77–22.99

4.1–5.2

9.95–12.89

qRFW-R2.1

2

7

30.42–30.55

4.1–7.5

9.84–18.64

qRFW-R5.1

5

2

18.69–18.70

4.9–5.2

11.89–12.43

qRFW-R10.1

10

4

17.08–17.13

4.3–5.4

10.35–15.23

qRDW-R1.1

1

5

22.77–22.84

4.2–4.3

10.06–11.38

qRDW-R2.1

2

5

30.42–30.55

4.3–5.7

10.32–13.90

qRDW-R7.1

7

3

19.66–19.67

4.5–7.2

10.90–18.05