Table 3 Summary of the GWAS results for all 10 measured traits
Condition | Group | Association | SSI | SSD | SN | HD | GY | PN | TSN | FGN | SSR | TGW | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Hydroponics | Geng | No. SNPs | 83 | 25 | – | – | – | – | – | – | – | – | 107 |
No. SNPs | 56 | 13 | – | – | – | – | – | – | – | – | 68 | ||
Xian | No. SNPs | 105 | 108 | – | – | – | – | – | – | – | – | 165 | |
No. SNPs | 39 | 50 | – | – | – | – | – | – | – | – | 74 | ||
Total | No. SNPs | 188 | 133 | – | – | – | – | – | – | – | – | 272 | |
No. SNPs | 95 | 63 | – | – | – | – | – | – | – | – | 142 | ||
Y16 | Geng | No. SNPs | – | – | 12 | – | 6 | 129 | 7 | 6 | 9 | 0 | 169 |
No. SNPs | – | – | 11 | – | 5 | 44 | 7 | 5 | 2 | 0 | 74 | ||
Xian | No. SNPs | – | – | 257 | – | 21 | 101 | 18 | 282 | 58 | 179 | 862 | |
No. SNPs | – | – | 93 | – | 15 | 52 | 15 | 88 | 48 | 63 | 342 | ||
Total | No. SNPs | – | – | 269 | – | 27 | 230 | 25 | 288 | 67 | 179 | 1031 | |
No. SNPs | – | – | 104 | – | 20 | 96 | 22 | 93 | 50 | 63 | 415 | ||
Y17 | Geng | No. SNPs | – | – | 85 | 16 | 113 | 48 | 16 | 59 | 13 | 0 | 341 |
No. SNPs | – | – | 22 | 14 | 58 | 23 | 12 | 22 | 8 | 0 | 151 | ||
Xian | No. SNPs | – | – | 101 | 19 | 19 | 41 | 191 | 61 | 63 | 4 | 492 | |
No. SNPs | – | – | 57 | 14 | 10 | 26 | 85 | 46 | 21 | 3 | 256 | ||
Total | No. SNPs | – | – | 186 | 35 | 132 | 89 | 207 | 120 | 76 | 4 | 832 | |
No. SNPs | – | – | 79 | 28 | 68 | 49 | 97 | 68 | 29 | 3 | 403 |