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Table 2 Distribution of high quality SNP markers in the rice genome

From: Identification of genes for salt tolerance and yield-related traits in rice plants grown hydroponically and under saline field conditions by genome-wide association study

ChrAll SNPs a10% set bSNPs within genes c
No. of SNPsSpacing
No. of SNPsSpacing
No. of genesNo. of SNPsSpacing
  1. aAll SNPs with minor allele frequency > 0.05 and missing data rate < 20%; bRandomly sampled set of 10% of the SNPs from the complete SNP dataset; cAll SNPs distributed in 44,332 annotated genes