Skip to main content

Table 1 Molecular markers used for foreground selection in this study

From: Improvement of rice blast resistance by developing monogenic lines, two-gene pyramids and three-gene pyramid through MAS

Marker

Type

Chr.

Forward primer sequence

Reverse primer sequence

Annealing temperature (°C)

Separation

RM224

SSR

11

ATCGATCGATCTTCACGAGG

TGCTATAAAAGGCATTCGGG

56

8% PAGE

Ind306

Indel

6

TGACTTCCAAACGGTAGC

AGAGCTCGTGAACGGAATG

56

8% PAGE

Pita-Ext

Pita-based marker

12

TGCGCAAAGAATCGTCGCTGC

TCTTTGATCCAAGTGTTAGGGCC

62

1% Agarose gel

Pita-Int

12

CCGTGGCTTCTATCTTTACCTG

AGTCAGGTTGAAGATGCATAGA

62