Table 1 Details of putative NCX proteins encoded in the Arabidopsis and rice genomes. Table enlists NCX genes in Arabidopsis and rice along with their corresponding proteins, their existing nomenclature in TAIR, locus identifiers, CDS, protein length, chromosomal locations and domain architecture
Gene | Protein | Nomenclature in TAIR/RGAP | Locus | CDS length (bp) | Protein length (aa) | Coordinates (5′-3′) | Domain architecture |
|---|---|---|---|---|---|---|---|
Arabidopsis thaliana | |||||||
AtNCX1 | AtNCX1 | AtCAX11 | AT1G08960.1 | 1248 | 416 | 2879642 - 2882231 |
|
AtNCX2 | AtNCX2 | Sodium/calcium exchanger | AT1G53210.1 | 1758 | 586 | 19844632 - 19847836 |
|
AtNCX3 | AtNCX3 | AtCCX4 | AT1G54115.1 | 1935 | 645 | 20202118 - 20204177 |
|
AtNCX4 | AtNCX4 | AtCAX6 | AT1G55720.1 | 1449 | 467 | 20828118 - 20830640 |
|
AtNCX5 | AtNCX5.1 | Â AtCAX5 | AT1G55730.1 | 1326 | 442 | 20831052 - 20834519 |
|
| Â | AtNCX5.2 | AT1G55730.2 | 1326 | 442 | 20831052-20834512 | ||
AtNCX6 | AtNCX6.1 | Â AtCAX1 | AT2G38170.1 | 1392 | 464 | 15989083 - 15993278 |
|
| Â | AtNCX6.2 | AT2G38170.2 | 1179 | 393 | 15989083 - 15993276 | ||
| Â | AtNCX6.3 | AT2G38170.3 | 1428 | 476 | 15990045 - 15993278 | ||
AtNCX7 | AtNCX7 | AtMHX1 | AT2G47600.1 | 1620 | 540 | 19524160 - 19527413 |
|
AtNCX8 | AtNCX8 | AtCAX2 | AT3G13320.1 | 1326 | 442 | 4314529 - 4318351 |
|
AtNCX9 | AtNCX9 | AtCCX3 | AT3G14070.1 | 1932 | 644 | 4661143 - 4663074 |
|
AtNCX10 | AtNCX10 | AtCAX3 | AT3G51860.1 | 1380 | 460 | 19239427 - 19242913 |
|
AtNCX11 | AtNCX11 | AtCAX4 | AT5G01490.1 | 1365 | 455 | 195541 - 198524 |
|
AtNCX12 | AtNCX12 | AtCAX8 | AT5G17850.1 | 1680 | 560 | 5899253 - 5900932 |
|
AtNCX13 | AtNCX13 | AtCAX7 | AT5G17860.1 | 1713 | 571 | 5902394 - 5904380 |
|
Oryza sativa | |||||||
OsNCX1 | OsNCX1.1 | Sodium/calcium exchanger | LOC_Os01g11414.1 | 1755 | 584 | 6134202 -6139819 |
|
| Â | OsNCX1.2 | LOC_Os01g11414.2 | 1284 | 427 | 6136830-6139189 | ||
OsNCX2 | OsNCX2.1 | OsCAX1a | LOC_Os01g37690.1 | 1356 | 451 | 21076730 - 21071370 |
|
| Â | OsNCX2.2 | LOC_Os01g37690.2 | 1065 | 354 | 21073919-21072230 | ||
OsNCX3 | OsNCX3 | Sodium/calcium exchanger | LOC_Os02g04630.1 | 1089 | 362 | 2070492 - 2075369 |
|
OsNCX4 | OsNCX4.1 | Sodium/calcium exchanger | LOC_Os02g14980.1 | 1728 | 575 | 8358769 - 8362960 |
|
| Â | OsNCX4.2 | LOC_Os02g14980.2 | 1281 | 426 | 8359318-8362959 | ||
OsNCX5 | OsNCX5.1 | OsCAX1c | LOC_Os02g21009.1 | 1353 | 450 | 12432287 - 12451812 |
|
| Â | OsNCX5.2 | LOC_Os02g21009.2 | 1353 | 451 | 12432287 - 12448557 | ||
OsNCX6 | OsNCX6 | Sodium/calcium exchanger | LOC_Os03g08230.1 | 1920 | 639 | 4196467 - 4194283 |
|
OsNCX7 | OsNCX7.1 | Sodium/calcium exchanger | LOC_Os03g27960.1 | 1317 | 437 | 16061184 - 16065169 |
|
| Â | OsNCX7.2 | LOC_Os03g27960.2 | 1314 | 437 | 16061151 - 16065169 | ||
OsNCX8 | OsNCX8 | Sodium/calcium exchanger | LOC_Os03g45370.1 | 1728 | 575 | 25613825 - 25616214 |
|
OsNCX9 | OsNCX9.1 | OsCAX3 | LOC_Os04g55940.1 | 1254 | 417 | 33314630 - 33319375 |
|
| Â | OsNCX9.2 | LOC_Os04g55940.2 | 1254 | 418 | 33315199-33319375 | ||
OsNCX10 | OsNCX10 | OsCAX1b | LOC_Os05g51610.1 | 1362 | 453 | 29593841 - 29588646 |
|
OsNCX11 | OsNCX11 | Sodium/calcium exchanger | LOC_Os10g30070.1 | 1794 | 597 | 15614210 - 15616127 |
|
OsNCX12 | OsNCX12 | Sodium/calcium exchanger | LOC_Os11g01580.1 | 1068 | 355 | 335287 – 334094 |
|
OsNCX13 | OsNCX13 | Sodium/calcium exchanger | LOC_Os11g05070.1 | 798 | 265 | 2220748 - 2217645 |
|
OsNCX14 | OsNCX14.1 | Sodium/calcium exchanger | LOC_Os11g43860.1 | 1572 | 523 | 26492383 - 26488372 |
|
| Â | OsNCX14.2 | LOC_Os11g43860.2 | 1305 | 434 | 26492229 - 26488372 | ||
OsNCX15 | OsNCX15 | Sodium/calcium exchanger | LOC_Os12g42910.1 | 1764 | 587 | 26669155 - 26671200 |
|
-
NXC, 
EF-hand, 
CAX domian
NXC, 
EF-hand, 
CAX domian