Table 4 Gene ontology analysis of genes upregulated by excess Fe in shoots
From: Transcriptomic analysis of rice in response to iron deficiency and excess
GO ID | GO term | Query | Total | *FDR |
|---|---|---|---|---|
GO:0006412 | Translation | 19 | 683 | 2.40E-14 |
GO:0010467 | Gene expression | 25 | 2581 | 6.40E-09 |
GO:0044249 | Cellular biosynthetic process | 29 | 5899 | 0.00013 |
GO:0044267 | Cellular protein metabolic process | 19 | 2983 | 0.00013 |
GO:0034645 | Cellular macromolecule biosynthetic process | 24 | 5248 | 0.00082 |
GO:0055086 | Nucleobase, nucleoside and nucleotide metabolic | 5 | 275 | 0.0013 |
GO:0006091 | Generation of precursor metabolites and energy | 5 | 308 | 0.002 |
GO:0044237 | Cellular metabolic process | 32 | 10813 | 0.041 |
GO:0003735 | Structural constituent of ribosome | 19 | 455 | 2.20E-18 |
GO:0005198 | Structural molecule activity | 19 | 531 | 1.80E-17 |
GO:0015935 | Small ribosomal subunit | 17 | 59 | 7.60E-31 |
GO:0030529 | Ribonucleoprotein complex | 20 | 503 | 1.20E-18 |
GO:0005840 | Ribosome | 19 | 456 | 2.70E-18 |
GO:0032991 | Macromolecular complex | 25 | 1365 | 3.10E-15 |
GO:0005737 | Cytoplasm | 20 | 1271 | 1.40E-11 |
GO:0043228 | Non-membrane-bounded organelle | 19 | 1590 | 2.90E-09 |
GO:0005622 | intracellular | 28 | 4460 | 5.10E-07 |
GO:0043226 | organelle | 22 | 3164 | 1.10E-06 |
GO:0005623 | cell | 28 | 6353 | 0.00015 |
GO:0043234 | protein complex | 5 | 799 | 0.04 |