Figure 5

Degradome sequencing data-based identification of the targets regulated by certain phased small RNAs (sRNAs). As shown in Figure 4, the phased sRNAs enriched in Argonaute 1 (numbered and highlighted in orange color in Figure 4B, C, E and F) were selected for this analysis. For all the panels, the x axes indicate the positions of the miRNA binding sites (marked by blue horizontal lines) on the mature mRNAs, and the y axes measure the intensity (normalized in RPM, reads per million) of the degradome signals. The prominent cleavage signals were marked by arrowheads. The figure keys for degradome signals belonging to different libraries are shown on the first panel. The target transcript IDs and the phased sRNA IDs are shown on the top of each panel. For each plot, the alignment of the sRNA sequence against the binding site is shown, and the cleavage site(s) was (were) indicated by vertical dotted line(s).