|
Chr
|
length (bp)a
|
NIAS
|
CSHL
|
NIAS + CSHL
|
|---|
|
Covb (%)
|
Effc (%)
|
Cov (%)
|
Eff (%)
|
Cov (%)
|
Eff (%)
|
|---|
|
chr01
|
43,270,899
|
35,791,098 (82.7%)
|
18,246,140 (42.2%)
|
39,956,568 (92.3%)
|
38,068,615 (88.0%)
|
39,961,540 (92.4%)
|
38,175,168 (88.2%)
|
|
chr02
|
35,937,247
|
30,154,356 (83.9%)
|
15,638,850 (43.5%)
|
33,524,321 (93.3%)
|
32,062,712 (89.2%)
|
33,528,628 (93.3%)
|
32,148,332 (89.5%)
|
|
chr03
|
36,413,819
|
31,059,089 (85.3%)
|
15,977,692 (43.9%)
|
34,365,834 (94.4%)
|
32,996,819 (90.6%)
|
34,369,143 (94.4%)
|
33,082,516 (90.9%)
|
|
chr04
|
35,502,790
|
26,736,290 (75.3%)
|
12,921,248 (36.4%)
|
31,176,439 (87.8%)
|
29,064,227 (81.9%)
|
31,186,864 (87.8%)
|
29,153,050 (82.1%)
|
|
chr05
|
29,958,438
|
23,400,797 (78.1%)
|
11,810,143 (39.4%)
|
26,853,884 (89.6%)
|
25,256,988 (84.3%)
|
26,857,426 (89.6%)
|
25,327,281 (84.5%)
|
|
chr06
|
31,248,789
|
24,651,481 (78.9%)
|
12,398,636 (39.7%)
|
28,084,165 (89.9%)
|
26,516,110 (84.9%)
|
28,088,052 (89.9%)
|
26,594,708 (85.1%)
|
|
chr07
|
29,697,629
|
23,447,981 (79.0%)
|
11,725,346 (39.5%)
|
26,880,079 (90.5%)
|
25,363,522 (85.4%)
|
26,883,654 (90.5%)
|
25,438,043 (85.7%)
|
|
chr08
|
28443,027
|
22,122,986 (77.8%)
|
11,013,746 (38.7%)
|
25,508,624 (89.7%)
|
23,953,312 (84.2%)
|
25,512,422 (89.7%)
|
24,024,380 (84.5%)
|
|
chr09
|
23,012,721
|
18,240,332 (79.3%)
|
9,052,990 (39.3%)
|
20,858,168 (90.6%)
|
19,681,323 (85.5%)
|
20,860,908 (90.6%)
|
19,739,054 (85.8%)
|
|
chr10
|
23,208,246
|
18,119,906 (78.1%)
|
8,873,977 (38.2%)
|
20,931,379 (90.2%)
|
19,673,976 (84.8%)
|
20,934,165 (90.2%)
|
19,732,853 (85.0%)
|
|
chr11
|
29,021,139
|
22,586,659 (77.8%)
|
11,082,625 (38.2%)
|
25,987,560 (89.5%)
|
24,468,775 (84.3%)
|
25,990922 (89.6%)
|
24,546,522 (84.6%)
|
|
chr12
|
27,531,905
|
20,923,037 (76.0%)
|
10,270,579 (37.3%)
|
24,427,691 (88.7%)
|
22,818,854 (82.9%)
|
24,432,616 (88.7%)
|
22,891,243 (83.1%)
|
|
Total
|
373,246,649
|
297,234,012 (79.6%)
|
149,011,972 (39.9%)
|
338,554,712 (90.7%)
|
31,9925,233 (85.7%)
|
338,606,340 (90.7%)
|
320,853,150 (86.0%)
|
- a Length before error correction.
- b Cov: Number of sites covered with at least one read.
- c Eff: Number of effective sites covered with at least 10 high quality (base quality ≥20) reads.
