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Table 6 Summary of the clustering analysis with average values and standard deviations (sd) for each variable in each cluster

From: Phenomics of rice early vigour and drought response: Are sugar related and morphogenetic traits relevant?

 

Cluster 1

Cluster 2

Cluster 3

Genotypes distant from the center

IR64, Cirad 488, Bicobranco

Azucena, IAC 25, Dourado Aguila

Early mutant IAC 165, DomSofid, IR729679

Number of individuals

14

15

14

Constitutive variables measure of early vigor

 

Average

Sd

 

Average

Sd

 

Average

Sd

 

SDWc

1.80E-05

3.35E-06

a+

1.71E-05

2.95E-06

a+

1.24E-05

1.71E-06

b

LDIMc

4.62

1.08

b

6.21

0.96

a+

4.78

1.04

b

DRc

1.65E-02

1.21E-03

b+

1.05E-02

1.04E-03

a

1.55E-02

1.44E-03

ab

NBTc

6.30E-05

1.88E-05

b+

4.19E-05

1.01E-05

a

4.01E-05

1.45E-05

a

NBLc

1.73E-04

4.21E-05

b+

1.26E-04

2.19E-05

a

1.23E-04

2.71E-05

a

SOURSTAc

33.46

22.75

b

64.48

24.01

a+

55.43

24.14

abns

SOURSUCc

78.44

10.38

ans

81.71

14.08

ans

79.84

12.22

ans

SOURHEXc

10.66

3.98

b

16.40

6.70

a+

13.75

4.71

abns

SINKHEXc

68.75

33.39

ans

92.70

23.56

ans

76.24

25.65

ans

SINKSTAc

69.90

23.22

b

96.02

18.68

a+

75.18

19.13

b

SINKSUCc

65.88

18.00

b

85.50

12.56

a+

77.44

15.40

abns

ROLc

0.29

0.52

ans

0.23

0.40

ans

0.07

0.17

ans

LSENc

0.35

0.10

ans

0.33

0.09

ans

0.33

0.07

ans

Drought Response variables

 

Average

Sd

 

Average

Sd

 

Average

Sd

 

SDWdc/c

−0.19

0.19

a

−0.24

0.20

a

0.18

0.25

b+

LDIMdc/c

−0.11

0.16

abns

−0.22

0.14

a

0.23

0.64

b+

Dronsetdc/c

−0.13

0.16

b

0.07

0.19

a+

0.00

0.12

abns

NBTdc/c

−0.11

0.22

a

0.02

0.32

a

0.47

0.53

b+

NBLdc/c

−0.09

0.18

a

−0.09

0.16

a

0.15

0.16

b+

SOURSTAdc/c

−0.36

0.51

b+

−0.76

0.23

a

−0.69

0.21

a

SOURSUCdc/c

0.11

0.19

b+

−0.15

0.12

a

0.04

0.22

b+

SINKSUCdc/c

0.79

0.61

b+

0.18

0.22

a

0.38

0.29

a

ROLd

3.71

2.02

ans

4.67

1.71

ans

4.11

1.53

ans

LSENdc/c

0.29

0.42

ans

0.26

0.40

ans

0.23

0.34

ans

Drought Kinetics

 

Average

Sd

 

Average

Sd

 

Average

Sd

 

Number of days from stress onset to FSW 0.2

10.32

1.78

ans

10.23

2.51

ans

9.25

1.68

ans