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Table 2 Twenty most conserved rice protein interactions

From: A predicted protein interactome for rice

Locus A*

Locus B*

Protein A

Protein B

Species

CV

Os11g40150

Os11g40150

DNA repair protein RAD51 homolog A

DNA repair protein RAD51 homolog A

5

2080

Os02g55410

Os11g29380

DNA replication licensing factor MCM5

DNA replication licensing factor Mcm2

5

560

Os01g64820

Os12g13950

DNA polymerase alpha catalytic subunit

DNA polymerase alpha subunit B

5

720

Os02g38340

Os08g28190

actin-like protein 3

actin-like protein 2

5

1155

Os07g22400

Os12g13950

DNA primase large subunit

DNA polymerase alpha subunit B

5

450

Os01g36390

Os11g29380

DNA replication licensing factor mcm4

DNA replication licensing factor Mcm2

5

420

Os11g29380

Os12g37400

DNA replication licensing factor Mcm2

PROLIFERA protein

5

800

Os05g14590

Os11g29380

DNA replication licensing factor MCM6

DNA replication licensing factor Mcm2

5

595

Os01g72880

Os02g37920

MUTL protein homolog 1

ATP binding protein

4

2040

Os09g38030

Os09g38030

UTP--glucose-1-phosphate uridylyltransferase

UTP--glucose-1-phosphate uridylyltransferase

4

176

Os05g24970

Os11g43620

small nuclear ribonucleoprotein Sm D2

small nuclear ribonucleoprotein F

4

272

Os01g71990

Os01g71990

pyrroline-5-carboxylate reductase

pyrroline-5-carboxylate reductase

4

144

Os05g39850

Os11g29380

DNA replication licensing factor MCM3

DNA replication licensing factor Mcm2

4

476

Os02g55410

Os05g39850

DNA replication licensing factor MCM5

DNA replication licensing factor MCM3

4

448

Os07g02350

Os10g41520

casein kinase II subunit alpha-2

casein kinase II subunit beta-4

4

1368

Os03g53960

Os10g28040

transcriptional adaptor

general control of amino acid synthesis protein 5-like 2

4

2048

Os06g43790

Os06g44030

HAF01

transcription initiation factor TFIID subunit 5

4

580

Os02g52510

Os11g40150

DNA repair protein RAD54-like

DNA repair protein RAD51 homolog A

4

952

Os01g53600

Os09g33930

farnesyltransferase beta subunit

farnesyltransferase/geranylgeranyltransferase type IA

4

456

Os05g32310

Os08g08040

SAD1

LSM7 homolog, U6 small nuclear RNA associated

4

224

  1. *rice locus identifiers are also written as e.g. LOC_Os11g40150.