Table 1 Summary of major contractions and expansions observed on the aligned physical maps of four African species of Oryza to the RefSeq (O. sativa)
From: The Future of Rice Genomics: Sequencing the Collective Oryza Genome
Chromosome | O. barthii | O. glaberrima | O. punctata | O. brachyantha | ||||
|---|---|---|---|---|---|---|---|---|
Contractions | Expansions | Contractions | Expansions | Contractions | Expansions | Contractions | Expansions | |
Chr01 | 3 | 3 | 5 | 3 | 3 | 3 | 3 | 0 |
Chr02 | 4 | 2 | 4 | 3 | 5 | 1 | 9 | 0 |
Chr03 | 3 | 3 | 4 | 4 | 1 | 5 | 2 | 2 |
Chr04 | 5 | 8 | 2 | 1 | 2 | 3 | 9 | 0 |
Chr05 | 2 | 0 | 8 | 0 | 1 | 1 | 8 | 0 |
Chr06 | 2 | 2 | 2 | 1 | 3 | 2 | 4 | 0 |
Chr07 | 1 | 1 | 8 | 2 | 1 | 6 | 4 | 0 |
Chr08 | 2 | 1 | 5 | 1 | 2 | 2 | 11 | 0 |
Chr09 | 3 | 3 | 2 | 1 | 3 | 1 | 4 | 0 |
Chr10 | 4 | 3 | 5 | 2 | 5 | 2 | 8 | 0 |
Chr11 | 5 | 4 | 4 | 2 | 5 | 5 | 4 | 1 |
Chr12 | 4 | 2 | 4 | 1 | 3 | 5 | 5 | 0 |
Total | 38 | 32 | 53 | 21 | 34 | 36 | 71 | 3 |