Table 1 Sorghum Genes with SFPs Predicted by the GeSNP Software
From: Molecular Markers for Sweet Sorghum Based on Microarray Expression Data
Gene ID | #SFPsa | #Validated SFPs | #SNPs | Sequence length |
|---|---|---|---|---|
Ch1 | ||||
Sb01g005770 | 1 | 0 | 0 | 378 |
Sb01g049890 | 1 | 1 | 2 | 401 |
Sb01g002050 | 1 | 0 | 0 | 429 |
Sb01g033060 | 1 | 0 | 0 | 429 |
Sb01g013710 | 3 | 0 | 2 | 214 |
Sb01g043060 | 2 | 0 | 4 | 418 |
Sb01g046550 | 2 | 0 | 0 | 318 |
Sb01g003700 | 1 | 0 | 0 | 455 |
Sb01g011740 | 1 | 0 | 0 | 233 |
Sb01g006220 | 1 | 0 | 0 | 292 |
Sb01g009520 | 2 | 0 | 0 | 404 |
Sb01g016110 | 5 | 0 | 0 | 397 |
Sb01g044810 | 6 | 0 | 5 | 502 |
Ch2 | ||||
Sb02g006330 | 2 | 1 | 2 | 191 |
Sb02g000780 | 1 | 1 | 2 | 273 |
Sb02g005440 | 1 | 0 | 0 | 464 |
Sb02g036870 | 2 | 0 | 0 | 225 |
Sb02g022510 | 1 | 0 | 0 | 552 |
Sb02g006420 | 4 | 2 | 5 | 731 |
Sb02g009980 | 3 | 2 | 2 | 363 |
Sb02g032470 | 2 | 0 | 1 | 438 |
Ch3 | ||||
Sb03g039090 | 6 | 4 | 2 | 405 |
Sb03g037370 | 1 | 1 | 2 | 311 |
Sb03g009900 | 2 | 0 | 0 | 517 |
Sb03g037360 | 2 | 0 | 0 | 400 |
Sb03g013840 | 4 | 0 | 0 | 139 |
Sb03g012420 | 3 | 2 | 1 | 144 |
Sb03g007840 | 1 | 0 | 2 | 355 |
Sb03g037870 | 6 | 0 | 0 | 333 |
Sb03g045390 | 1 | 0 | 0 | 558 |
Sb03g027710 | 1 | 0 | 1 | 341 |
Sb03g003190 | 2 | 0 | 0 | 454 |
Ch4 | ||||
Sb04g028300 | 1 | 0 | 0 | 494 |
Sb04g027910 | 2 | 0 | 0 | 485 |
Sb04g021610 | 1 | 0 | 0 | 209 |
Sb04g037170 | 1 | 1 | 2 | 346 |
Sb04g019020 | 8 | 3 | 6 | 235 |
Sb04g005210 | 1 | 1 | 1 | 236 |
Ch5 | ||||
Sb05g001680 | 2 | 1 | 3 | 153 |
Ch6 | ||||
Sb06g015180 | 2 | 0 | 3 | 314 |
Sb06g026710 | 1 | 0 | 0 | 277 |
Sb06g029500 | 2 | 0 | 0 | 486 |
Ch7 | ||||
Sb07g001320 | 7 | 0 | 0 | 473 |
Sb07g005930 | 1 | 1 | 2 | 436 |
Ch8 | ||||
Sb08g008320 | 1 | 1 | 7 | 447 |
Sb08g016302 | 1 | 0 | 3 | 268 |
Sb08g020760 | 1 | 0 | 3 | 488 |
Sb08g015010 | 4 | 0 | 0 | 484 |
Sb08g002250 | 6 | 5 | 4 | 316 |
Sb08g002660 | 1 | 0 | 0 | 345 |
Ch9 | ||||
Sb09g000820 | 1 | 1 | 2 | 394 |
Sb09g023620 | 1 | 0 | 0 | 434 |
Sb09g006050 | 2 | 2 | 3 | 268 |
Sb09g005280 | 2 | 1 | 1 | 527 |
Sb09g029170 | 1 | 0 | 10 | 406 |
Ch10 | ||||
Sb10g002230 | 1 | 0 | 2 | 398 |
Sb10g007380 | 1 | 1 | 2 | 374 |
Sb10g004540 | 1 | 0 | 0 | 255 |
Total | 125 | 32 | 87 | 21,612 |