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Table 1 Signal Distribution of Alternative Transcripts in the NSF45K Light vs. Dark Experiment

From: Analysis of Alternatively Spliced Rice Transcripts Using Microarray Data

Primary oligoa Number of alternative oligos in each log2-valueb
Conditions of upregulation # of loci # of alternative oligos >1.0 0.5 to 1 0.1 to 0.5 0.1 to −0.1 (−0.1) to (−0.5) −0.5 to (−1.0) <(−1.0)
Light (log2 > 1) 243 282 160 46 55 13 7 1 0
Dark (log2 < −1) 264 349 2 9 25 37 68 79 129
  1. Analysis of potential alternatively spliced loci for which at least one oligo (i.e., transcript) showed a twofold change in expression (|log2(light/dark)| ≥1)
  2. aThe primary oligo was set as the probe for each locus that showed the highest absolute fluorescence on the array
  3. bDifferential expression, as indicated by log2 (light/dark) values for alternative nonprimary oligos for the differentially expressed loci