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Table 1 MicroRNA gene families conserved between Arabidopsis and Oryza sativa cv. Nipponbare

From: The Cornucopia of Small RNAs in Plant Genomes

miRNA family

Arabidopsis gene members

Oryza sativa (Nipponbare) genes

Target family in Arabidopsis

Target gene number

A.t.

O.s

miR156/157

12

12

SBP*

11

9

miR159/319

6

8

MYB*; TCP*

8; 5

6; 4

miR160

3

6

ARF*

3

5

miR162

2

2

Dicer

1

1

miR164

3

5

NAC*

6

6

miR165/166

9

12

HD-ZIPIII*

5

4

miR167

4

9

ARF*

2

4

miR168

2

2

ARGONAUTE

1

6

miR169

14

17

HAP2*

8

7

miR170/171

4

7

SCL*

3

5

miR172

5

3

AP2*

6

5

miR390

3

1

ta-siRNA; receptor-like kinase

1; 4

2; 15

miR393

2

2

bZIP*

1

1

miR394

2

1

F-box

1

1

miR395

6

19

APS; SO2 transporter

3; 1

1; 2

miR396

2

5

GRF*

7

9

miR397

2

2

Laccase

3

15

miR398

3

2

CSD; CytC oxidase

2; 1

2; 1

miR399

6

11

PO4 transporter; E2-UBC

1; 1

4; 1

miR408

1

1

Laccase; Plantacyanin

3; 1

2; 3

  1. The target family list includes predicted and confirmed targets of Arabidopsis miRNAs (an asterisk denotes a transcription factor target). The number of predicted target genes for each target family in Arabidopsis (A.t.) and Oryza sativa (O.s.). This table was adapted and modified from Jones-Rhoades et al. [4]
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