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  1. Africa contains a huge diversity of both cultivated and wild rice species. The region has eight species representing six of the ten known genome types. Genetic resources of these species are conserved in vario...

    Authors: Peterson W Wambugu, Agnelo Furtado, Daniel LE Waters, Desterio O Nyamongo and Robert J Henry

    Citation: Rice 2013 6:29

    Content type: Review

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  2. Plants, as sessile organisms experience various abiotic stresses, which pose serious threat to crop production. Plants adapt to environmental stress by modulating their growth and development along with the va...

    Authors: Kundan Kumar, Manu Kumar, Seong-Ryong Kim, Hojin Ryu and Yong-Gu Cho

    Citation: Rice 2013 6:27

    Content type: Review

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  3. The perennial, Oryza rufipogon distributed from Asia to Australia and the annual O. meridionalis indigenous to Australia are AA genome species in the Oryza. However, recent research has demonstrated that the Aust...

    Authors: Masahiro Sotowa, Kenta Ootsuka, Yuu Kobayashi, Yin Hao, Katsunori Tanaka, Katsuyuki Ichitani, Jonathan M Flowers, Michael D Purugganan, Ikuo Nakamura, Yo-Ichiro Sato, Tadashi Sato, Darren Crayn, Bryan Simon, Daniel LE Waters, Robert J Henry and Ryuji Ishikawa

    Citation: Rice 2013 6:26

    Content type: Research

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  4. Flowering time, which is often associated with the length of the growth period in rice, determines the adaptability of a plant to various environments. However, little is known about how flowering-time genes a...

    Authors: Shikai Hu, Guojun Dong, Jie Xu, Yan Su, Zhenyuan Shi, Weijun Ye, Yuanyuan Li, Gengmi Li, Bin Zhang, Jiang Hu, Qian Qian, Dali Zeng and Longbiao Guo

    Citation: Rice 2013 6:24

    Content type: Research

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  5. Chilling stress is a major factor limiting rice production. Rice genotypes differ greatly in their seedling chilling tolerance (CT), which is known to involve differential expression of large numbers of genes ...

    Authors: Xiu-Qin Zhao, Wen-Sheng Wang, Fan Zhang, Ting Zhang, Wen Zhao, Bin-Ying Fu and Zhi-Kang Li

    Citation: Rice 2013 6:23

    Content type: Research

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  6. Cis-acting elements are essential genomic sequences that control gene expression. In higher eukaryotes, a series of cis-elements function cooperatively. However, further studies are required to examine the co-reg...

    Authors: Yusuke Kakei, Yuko Ogo, Reiko N Itai, Takanori Kobayashi, Takashi Yamakawa, Hiromi Nakanishi and Naoko K Nishizawa

    Citation: Rice 2013 6:22

    Content type: Research

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  7. With an increasing world population and a gradual decline in the amount of arable land, food security remains a global challenge. Continued increases in rice yield will be required to break through the barrier...

    Authors: Meijuan Duan, Zhizhong Sun, Liping Shu, Yanning Tan, Dong Yu, Xuewu Sun, Ruifen Liu, Yujie Li, Siyu Gong and Dingyang Yuan

    Citation: Rice 2013 6:21

    Content type: Research

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  8. Accumulation of genome-wide transcriptome data provides new insight on a genomic scale which cannot be gained by analyses of individual data. The majority of rice (O. sativa) species are japonica and indica culti...

    Authors: Ki-Hong Jung, Hyun-Jung Gho, Hoi-Khoanh Giong, Anil Kumar Nalini Chandran, Quynh-Nga Nguyen, HeeBak Choi, Tian Zhang, Wen Wang, Jin-Hyun Kim, Hong-Kyu Choi and Gynheung An

    Citation: Rice 2013 6:19

    Content type: Research

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  9. Bph3, a major brown planthopper (BPH) resistance locus derived from the rice cultivar Rathu Heenati (RH), has been used as a stable donor of traits that improve highly susceptible aromatic rice varieties in Thail...

    Authors: Wintai Kamolsukyunyong, Wissarut Sukhaket, Vinitchan Ruanjaichon, Theerayut Toojinda and Apichart Vanavichit

    Citation: Rice 2013 6:18

    Content type: Short report

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  10. The rice transcription factors IDEF1, IDEF2, and OsIRO2 have been identified as key regulators of the genes that control iron (Fe) uptake, including the biosynthesis of mugineic acid-family phytosiderophores (...

    Authors: Reiko Nakanishi Itai, Yuko Ogo, Takanori Kobayashi, Hiromi Nakanishi and Naoko K Nishizawa

    Citation: Rice 2013 6:16

    Content type: Research

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  11. Functional annotations of large plant genome projects mostly provide information on gene function and gene families based on the presence of protein domains and gene homology, but not necessarily in associatio...

    Authors: Palitha Dharmawardhana, Liya Ren, Vindhya Amarasinghe, Marcela Monaco, Jim Thomason, Dean Ravenscroft, Susan McCouch, Doreen Ware and Pankaj Jaiswal

    Citation: Rice 2013 6:15

    Content type: Research

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  12. Next-generation sequencing and ‘omics’ platforms are used extensively in plant biology research to unravel new genomes and study their interactions with abiotic and biotic agents in the growth environment. Des...

    Authors: Mamatha Hanumappa, Justin Preece, Justin Elser, Denise Nemeth, Gina Bono, Kenny Wu and Pankaj Jaiswal

    Citation: Rice 2013 6:14

    Content type: Research

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  13. Bacterial grain rot (BGR), caused by the bacterial pathogen Burkholderia glumae, is a destructive disease of rice. Because BGR tends to be highly affected by environmental conditions such as temperature and humid...

    Authors: Ritsuko Mizobuchi, Hiroyuki Sato, Shuichi Fukuoka, Takanari Tanabata, Seiya Tsushima, Tokio Imbe and Masahiro Yano

    Citation: Rice 2013 6:13

    Content type: Research

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  14. Phytic acid (InsP6) is considered as the major source of phosphorus and inositol phosphates in cereal grains. Reduction of phytic acid level in cereal grains is desirable in view of its antinutrient properties to...

    Authors: Nusrat Ali, Soumitra Paul, Dipak Gayen, Sailendra Nath Sarkar, Swapan K Datta and Karabi Datta

    Citation: Rice 2013 6:12

    Content type: Research

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  15. This article describes the development of Multi-parent Advanced Generation Inter-Cross populations (MAGIC) in rice and discusses potential applications for mapping quantitative trait loci (QTLs) and for rice v...

    Authors: Nonoy Bandillo, Chitra Raghavan, Pauline Andrea Muyco, Ma Anna Lynn Sevilla, Irish T Lobina, Christine Jade Dilla-Ermita, Chih-Wei Tung, Susan McCouch, Michael Thomson, Ramil Mauleon, Rakesh Kumar Singh, Glenn Gregorio, Edilberto Redoña and Hei Leung

    Citation: Rice 2013 6:11

    Content type: Research

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  16. Plant growth regulators play important roles in plant growth and development, but little is known about roles of plant growth regulators in yield, grain qualities and antioxidant enzyme activities in super hyb...

    Authors: Shenggang Pan, Fahd Rasul, Wu Li, Hua Tian, Zhaowen Mo, Meiyang Duan and Xiangru Tang

    Citation: Rice 2013 6:9

    Content type: Research

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  17. Anther culture has advantage to obtain a homozygous progeny by induced doubling of haploid chromosomes and to improve selection efficiency for invaluable agronomical traits. Therefore, anther culturing is wide...

    Authors: In-Seon Jeong, Ung-Han Yoon, Gang-Seob Lee, Hyeon-So Ji, Hyun-Ju Lee, Chang-Deok Han, Jang-Ho Hahn, Gynheung An and Tae-Ho Kim

    Citation: Rice 2013 6:6

    Content type: Research

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  18. The development of resistant cultivars has been the most effective and economical strategy to control bacterial leaf blight (BB) disease of rice caused by Xanthomonas oryzae pv. oryzae (Xoo). Molecular markers ha...

    Authors: Jung-Pil Suh, Ji-Ung Jeung, Tae-Hwan Noh, Young-Chan Cho, So-Hyun Park, Hyun-Su Park, Mun-Sik Shin, Chung-Kon Kim and Kshirod K Jena

    Citation: Rice 2013 6:5

    Content type: Research

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  19. Rice research has been enabled by access to the high quality reference genome sequence generated in 2005 by the International Rice Genome Sequencing Project (IRGSP). To further facilitate genomic-enabled resea...

    Authors: Yoshihiro Kawahara, Melissa de la Bastide, John P Hamilton, Hiroyuki Kanamori, W Richard McCombie, Shu Ouyang, David C Schwartz, Tsuyoshi Tanaka, Jianzhong Wu, Shiguo Zhou, Kevin L Childs, Rebecca M Davidson, Haining Lin, Lina Quesada-Ocampo, Brieanne Vaillancourt, Hiroaki Sakai…

    Citation: Rice 2013 6:4

    Content type: Research

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  20. Rice is a major source of dietary intake of arsenic (As) for the populations that consume rice as a staple food. Therefore, it is necessary to reduce the As concentration in rice to avoid the potential risk to...

    Authors: Masato Kuramata, Tadashi Abe, Akira Kawasaki, Kaworu Ebana, Taeko Shibaya, Masahiro Yano and Satoru Ishikawa

    Citation: Rice 2013 6:3

    Content type: Research

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    The Correction to this article has been published in Rice 2018 11:29

  21. A lesion-mimic mutant in rice (Oryza sativa L.), spotted leaf 5 (spl5), displays a disease-resistance-enhanced phenotype, indicating that SPL5 negatively regulates cell death and resistance responses. To understa...

    Authors: Xifeng Chen, Shufang Fu, Pinghua Zhang, Zhimin Gu, Jianzhong Liu, Qian Qian and Bojun Ma

    Citation: Rice 2013 6:1

    Content type: Research

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  22. Crop improvement targeting high yield and tolerance to environmental stresses has become the need of the hour. Yield improvement via breeding or gene pyramiding aiming comprehensive incorporation of the agrono...

    Authors: Amit K Tripathi, Ashwani Pareek, Sudhir K Sopory and Sneh L Singla-Pareek

    Citation: Rice 2012 5:37

    Content type: Research

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  23. The rice small GTPase OsRac1 is a molecular switch in rice innate immunity. The Receptor for Activated Kinase C-1 (RACK1) interacts with OsRac1 to suppress the growth of the rice blast fungus, Magnaporthe oryzae....

    Authors: Mwathi Jane Wamaitha, Risa Yamamoto, Hann Ling Wong, Tsutomu Kawasaki, Yoji Kawano and Ko Shimamoto

    Citation: Rice 2012 5:35

    Content type: Research

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  24. The deficiency of human acid beta-glucosidase (hGCase) causes Gaucher disease, a rare genetically-inherited disorder currently treated by enzyme replacement therapy using recombinant CHO-derived GCase. In an a...

    Authors: Tamara Patti, Bruno Bembi, Piero Cristin, Flavia Mazzarol, Erika Secco, Carla Pappalardo, Rita Musetti, Maurizio Martinuzzi, Serena Versolatto, Roberta Cariati, Andrea Dardis and Stefano Marchetti

    Citation: Rice 2012 5:34

    Content type: Research

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  25. Actin depolymerizing factors (ADFs) are small actin-binding proteins. Many higher-plant ADFs has been known to involve in plant growth, development and pathogen defense. However, in rice the temporal and spati...

    Authors: Ya-Chen Huang, Wen-Lii Huang, Chwan-Yang Hong, Hur-Shen Lur and Men-Chi Chang

    Citation: Rice 2012 5:33

    Content type: Research

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  26. Glabrous rice, which lacks trichomes on the rice epidermis, is regarded as an important germplasm resource in rice breeding. Trichomes are derived from aerial epidermal cells and used as a model to study the c...

    Authors: Jinjun Li, Yundong Yuan, Zefu Lu, Liusha Yang, Rongcun Gao, Jingen Lu, Jiayang Li and Guosheng Xiong

    Citation: Rice 2012 5:32

    Content type: Research

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  27. Drought is the most severe abiotic stress reducing rice yield in rainfed drought prone ecosystems. Variation in intensity and severity of drought from season to season and place to place requires cultivation o...

    Authors: Anitha Raman, Satish Verulkar B, Nimai Mandal P, Mukund Variar, V Shukla D, J Dwivedi L, B Singh N, O Singh N, Padmini Swain, Ashutosh Mall K, S Robin, R Chandrababu, Abhinav Jain, Tilatoo Ram, Shailaja Hittalmani, Stephan Haefele…

    Citation: Rice 2012 5:31

    Content type: Research

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  28. Utilization of broad-spectrum resistance (R) genes is an effective and economical strategy to control the fungal pathogen Magnaporthe oryzae, the causal agent of the rice blast disease. Among the cloned blast res...

    Authors: Nan Jiang, Zhiqiang Li, Jun Wu, Yue Wang, Liqun Wu, Suhua Wang, Dan Wang, Ting Wen, Yi Liang, Pingyong Sun, Jinling Liu, Liangying Dai, Zhilong Wang, Chao Wang, Meizhong Luo, Xionglun Liu…

    Citation: Rice 2012 5:29

    Content type: Research

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  29. Glabrousness is an important agricultural trait for the practical breeding of rice. In this study, depilous (dep), the gene responsible for glabrous leaves and glumes of rice was identified by map-based cloning.

    Authors: Rosalyn B Angeles-Shim, Kenji Asano, Tomonori Takashi, Junghyun Shim, Takeshi Kuroha, Madoka Ayano and Motoyuki Ashikari

    Citation: Rice 2012 5:28

    Content type: Research

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  30. Minimal information exists on whole-plant dynamics of mineral flow through rice plants and on the source tissues responsible for mineral export to developing seeds. Understanding these phenomena in a model pla...

    Authors: Raul Antonio Sperotto, Marta Wilton Vasconcelos, Michael Andrew Grusak and Janette Palma Fett

    Citation: Rice 2012 5:27

    Content type: Research

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  31. While plant growth and reproduction is dependent on sunlight, UV irradiation from sunlight is one of the major genotoxic stresses that threaten plant survival and genome stability. In addition, many environmen...

    Authors: Yuepeng Zang, Qian Wang, Chenyu Xue, Mengnan Li, Rui Wen and Wei Xiao

    Citation: Rice 2012 5:24

    Content type: Research

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  32. Localized introduction and transient expression of T-DNA constructs mediated by agro-infiltration of leaf tissues has been largely used in dicot plants for analyzing the transitivity and the cell-to cell movem...

    Authors: Aurélie Andrieu, Jean Christophe Breitler, Christelle Siré, Donaldo Meynard, Pascal Gantet and Emmanuel Guiderdoni

    Citation: Rice 2012 5:23

    Content type: Research

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  33. Early vigour (biomass accumulation) is a useful but complex trait in rainfed rice (Oryza sativa L). Little is known on trade-offs with drought tolerance. This study explored the relevance of (sugar) metabolic and...

    Authors: Maria-Camila Rebolledo, Michael Dingkuhn, Anne Clément-Vidal, Lauriane Rouan and Delphine Luquet

    Citation: Rice 2012 5:22

    Content type: Research

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  34. After observing peculiar rice varieties in Myanmar, in terms of classification in varietal groups and of grain quality, we focused on Myanmar varieties and analyzed variations at 19 microsatellite loci as well...

    Authors: Khin Myo Myint, Brigitte Courtois, Ange-Marie Risterucci, Julien Frouin, Khin Soe, Khin Maung Thet, Apichart Vanavichit and Jean-Christophe Glaszmann

    Citation: Rice 2012 5:20

    Content type: Research

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  35. Although the genetic structure of rice germplasm has been characterized worldwide, few studies investigated germplasm from Thailand, the world’s largest exporter of rice. Thailand and the International Rice Re...

    Authors: Sriprapai Chakhonkaen, Keasinee Pitnjam, Wachira Saisuk, Kittipat Ukoskit and Amorntip Muangprom

    Citation: Rice 2012 5:19

    Content type: Research

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  36. The ideal plant architecture (IPA) includes several important characteristics such as low tiller numbers, few or no unproductive tillers, more grains per panicle, and thick and sturdy stems. We have developed an

    Authors: Shuangcheng Li, Kailong Xie, Wenbo Li, Ting Zou, Yun Ren, Shiquan Wang, Qiming Deng, Aiping Zheng, Jun Zhu, Huainian Liu, Lingxia Wang, Peng Ai, Fengyan Gao, Bin Huang, Xuemei Cao and Ping Li

    Citation: Rice 2012 5:18

    Content type: Short report

    Published on:

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