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Table 2 Targeted sequencing mutation site information

From: Targeted Identification of Rice Grain-Associated Gene Allelic Variation Through Mutation Induction, Targeted Sequencing, and Whole Genome Sequencing Combined with a Mixed-Samples Strategy

SNP number

Mixed sample number

Gene

Location

Ref

Mut

Function type

SNP-1

4–101

GS3

16,732,992

G

C

nonsynonymous SNV

SNP-2

4–101

GS3

16,734,441

G

T

stopgain

SNP-3

5–6

GS3

16,734,009

G

C

nonsynonymous SNV

SNP-4

6–23

GS3

16,731,920

C

A

nonsynonymous SNV

SNP-5

6–44

GS3

16,729,753

A

T

nonsynonymous SNV

SNP-6

6–44

GS3

16,729,861

G

T

nonsynonymous SNV

SNP-7

7–112

GS3

16,735,064

G

C

nonsynonymous SNV

SNP-8

7–41

GS3

16,729,815

C

T

nonsynonymous SNV

SNP-9

7–78

GS3

16,729,903

G

A

nonsynonymous SNV

SNP-10

7–78

GS3

16,729,863

C

A

nonsynonymous SNV

SNP-11

9−5

GS3

16,729,886

C

A

nonsynonymous SNV

SNP-12

5–35

GW5

5,365,411

A

G

nonsynonymous SNV

SNP-13

7–82

GW5

5,366,479

C

G

nonsynonymous SNV

SNP-14

10–14

GW5

5,366,520

T

G

nonsynonymous SNV

SNP-15

10–51

GW5

5,366,501

A

G

nonsynonymous SNV