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Table 8 The list of O. rufipogon accessions possessing combination of superior alleles at significant SNP positions associated with HGW where SNPs marked with * represent alleles absent in indica cultivars

From: Genotyping-by-Sequencing Based Investigation of Population Structure and Genome Wide Association Studies for Seven Agronomically Important Traits in a Set of 346 Oryza rufipogon Accessions

 

S1_1931325

S2_2875772

S2_3873759

S4_35115087

S4_4499266*

S5_24316574

Superior

CC

TT

TT

CC

AA

TT

CR100443

CC

TT

TT

TT

AA

TT

IR104777

CC

TT

TT

TT

AA

TT

IR104783

CC

CT

TT

TT

AA

TT

PR114

CC

TT

TT

TT

GG

TT