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Table 7 The list of O. rufipogon accessions possessing combination of superior alleles at significant SNP positions associated with CT where SNPs marked with * represent alleles absent in indica cultivars

From: Genotyping-by-Sequencing Based Investigation of Population Structure and Genome Wide Association Studies for Seven Agronomically Important Traits in a Set of 346 Oryza rufipogon Accessions

 

S1_1931325*

S2_21858276

S3_15462193

S7_1592572

S7_18874511

S7_24536919

S9_21545679

Superior

GG

GG

AA

CC

GG

GG

CC

IR82989

GG

GG

AA

CC

GG

GG

CC

IR83814

GG

GG

AA

CC

GG

GG

CC

IR88788

GG

GG

AA

CC

GG

GG

CC

CR100018A

GG

GG

AA

CC

GG

GG

CC

CR100018

GG

GG

AA

CC

GG

GG

CC

PR114

CC

GG

AA

CC

GG

GG

CC