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Table 6 The list of O. rufipogon accessions possessing combination of superior alleles at significant SNP positions associated with GW where SNPs marked with * represent alleles absent in indica cultivars

From: Genotyping-by-Sequencing Based Investigation of Population Structure and Genome Wide Association Studies for Seven Agronomically Important Traits in a Set of 346 Oryza rufipogon Accessions

 

S1_40142074*

S2_22216515

S3_7917671

S5_23720696

S5_28157471

S8_24621885*

S10_19238621*

Superior

AA

GG

GG

CC

CC

TT

GG

IR103308

AA

GG

GG

CC

CC

TT

GG

PR114

GG

GG

NN

CC

CC

CC

CC