Table 5 List of MTAs with significant differences between allelic effects on the basis of Kruskal–Wallis test
Trait | SNP | Chi-square | p-value |
|---|---|---|---|
CT | S1_1931325 | 19.100 | 1.24E−05 |
S2_21858276 | 21.327 | 3.87E−06 | |
S3_15462193 | 17.774 | 2.49E−05 | |
S7_1592572 | 31.947 | 1.24E−05 | |
S7_18874511 | 5.212 | 0.02243 | |
S7_24536919 | 10.542 | 0.001167 | |
S9_21545679 | 22.647 | 1.95E−06 | |
GL | S6_24807445 | 19.825 | 8.49E−06 |
S8_5775398 | 15.401 | 8.69E−05 | |
GW1 | S1_40142074 | 9.623 | 0.001922 |
S2_22216515 | 4.190 | 0.04066 | |
S3_7917671 | 19.100 | 1.24E−05 | |
S10_19238621 | 6.454 | 0.01107 | |
S10_19109511 | 20.360 | 6.42E−06 | |
S5_23720696 | 4.833 | 0.02792 | |
S8_24621885 | 16.743 | 4.28E−05 | |
S5_28157471 | 50.133 | 1.44E−12 | |
HGW | S1_1931325 | 36.661 | 1.41E−09 |
S5_24316574 | 6.032 | 0.01405 | |
S4_31,316,844 | 4.042 | 0.04438 | |
S4_4499266 | 17.879 | 2.36E−05 | |
S2_3873759 | 16.272 | 5.49E−05 | |
S2_2875772 | 50.715 | 1.07E−12 | |
PB | S4_30721851 | 14.919 | 0.0001122 |
S7_24282724 | 14.063 | 0.0001768 | |
PL | S2_30762305 | 12.208 | 0.0004759 |
S3_32359666 | 11.277 | 0.0007845 | |
S6_6597022 | 15.410 | 8.65E−05 | |
S6_11174827 | 7.097 | 0.00772 | |
S8_11774122 | 5.157 | 0.02316 | |
S9_4933781 | 3.946 | 0.04699 | |
S10_14320467 | 8.116 | 0.004388 | |
S10_16385834 | 7.232 | 0.007163 | |
S11_7438223 | 6.696 | 0.009661 |