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Table 11 The list of O. rufipogon accessions possessing combination of superior alleles at significant SNP positions associated with GL where SNPs marked with * represent alleles absent in indica cultivars

From: Genotyping-by-Sequencing Based Investigation of Population Structure and Genome Wide Association Studies for Seven Agronomically Important Traits in a Set of 346 Oryza rufipogon Accessions

 

S6_24807445

S8_5775398*

Superior

AA

TT

CR100013A

AA

TT

CR100443

AA

TT

CR100455

AA

TT

IR100923

AA

TT

IR81801

AA

TT

IR83813

AA

TT

IR103404

AA

TT

IR88788

AA

TT

IR93120

AA

TT

IR104404C

AA

TT

IR100597

AA

TT

IR100678

AA

TT

IR103850

AA

TT

IR104425

AA

TT

IR104641

AA

TT

IR104746

AA

TT

IR104766

AA

TT

IR104777

AA

TT

IR104783

AA

TT

IR104796

AA

TT

IR104821

AA

TT

IR104821A

AA

TT

IR104873

AA

TT

IR105240

AA

TT

IR105726

AA

TT

IR105491

AA

TT

CR100001

AA

TT

IR113661

AA

TT

CR100216

AA

TT

IR80562

AA

TT

CR100368

AA

TT

CR100465B

AA

TT

IR80660

AA

TT

CR100490

AA

TT

PR114

AA

CC