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Table 1 QTLs conferring plant height at maturity by 4 methods for identification using BSA-seq

From: BSA-Seq and Fine Linkage Mapping for the Identification of a Novel Locus (qPH9) for Mature Plant Height in Rice (Oryza sativa)

Method

QTL name

Chr

Start (bp)

End (bp)

Peak

Overlapping region (Mb)

Δ(SNP-index)

qPH7

7

4,780,001

16,920,000

−0.4781

4.78–16.92

 

qPH9

9

11,820,001

17,800,000

0.6201

11.82–17.80

ED-Value

qPH9

9

12,740,001

17,800,000

0.7888

12.74–17.80

G-Value

qPH7

7

8,380,001

10,520,000

23.9234

8.38–10.52

 

qPH9

9

12,800,001

17,800,000

40.9305

12.80–17.80

Fish-P-Value

qPH9

9

15,660,001

17,680,000

0.0090

15.66–17.68

  1. Chr chromosome, ED Euclidian distance, Fish-P-value Fisher’s exact test P-value