Table 1 Significant loci for rice bacterial blight resistance obtained from genome-wide association study

qC4–11

27,382,744–27,579,384

4

27,490,677

3.70E-08

L11(Zhang et al. 2017a), QBbr11–1(Chen et al. 2016)

qC5–4

31,060,503–31,170,315

2

31,071,832

1.60E-08

novel

qC5–5

283,658–476,382

51

348,262

2.81E-10

xa5(Iyer-Pascuzzi et al. 2008)

qC5–11.1

27,985,691–28,013,096

8

27,996,768

1.58E-09

xa44(t) (Kim 2018), L11(Zhang et al. 2017a), QBbr11–2(Chen et al. 2016)

qC5–11.2

28,430,697–28,479,727

7

28,479,727

9.75E-10

L11(Zhang et al. 2017a), QBbr11–2(Chen et al. 2016)

qC5–12

3,460,540–3,549,818

12

3,493,693

2.40E-10

novel

qV-5.1

288,855–443,952

272

436,664

1.14E-14

xa5(Iyer-Pascuzzi et al. 2008)

qV-5.2

444,857–476,382

98

464,676

3.55E-10

novel

qP9a-12.1

17,003,758–17,085,897

65

17,016,036

1.58E-13

L12(Zhang et al. 2017a)

qP9a-12.2

17,169,665–17,339,744

498

17,274,286

2.03E-16

L12(Zhang et al. 2017a), xa25(Liu et al. 2011)

qP9a-12.3

17,342,010–17,426,793

610

17,402,252

1.03E-14

L12(Zhang et al. 2017a)