Construction and integration of genetic linkage maps from three multi-parent advanced generation inter-cross populations in rice

Rice

Table 5 QTLs for heading date and plant height based on the integrated map in 8PL

QTL	Chr.	Pos. (CI) ^a (cM)	Left marker	Right marker	LOD	PVE (%) ^b	Genotypic effect
QTL	Chr.	Pos. (CI) ^a (cM)	Left marker	Right marker	LOD	PVE (%) ^b	a₁	a₂	a₃	a₄	a₅	a₆	a₇	a₈
IqHD1	1	263.71 (263.06–265.16)	Chr1–6,588,793	Chr1–5,958,935	9.97	3.54	2.61	2.47	1.19	−1.34	−1.37	−0.62	−1.37	−1.56
IqHD2	2	84.90 (83.15–85.75)	Chr2–3,433,320	Chr2–5,042,884	12.92	5.03	1.26	−2.19	0.73	−1.27	2.68	−1.33	2.18	−2.05
IqHD6.1	6	8.10 (7.75–8.45)	Chr6–5,681,741	Chr6–26,069,125	12.68	4.67	−1.44	−1.81	1.12	1.77	−1.64	−1.43	2.52	0.91
IqHD6.2	6	92.50 (92.15–92.75)	Chr6–3,305,201	Chr6–2,927,171	46.04	21.05	−0.81	−1.67	−1.21	−0.84	−2.64	−2.65	9.03	0.79
IqHD8	8	42.40 (42.35–42.55)	Chr8–6,181,174	Chr8–9,288,403	9.11	3.23	2.05	−0.41	1.53	−3.72	−0.82	− 0.11	−0.45	1.94
IqPH1	1	358.21 (358.06–358.26)	Chr1–38,503,485	Chr1–38,103,681	19.49	9.47	−2.49	− 2.86	7.78	−5.47	−4.61	7.18	3.34	−2.88
IqPH2	2	304.21 (304.16–304.76)	Chr2–418,968	Chr2–2,416,287	11.11	5.19	−4.67	1.96	3.66	−1.56	−2.36	4.85	0.86	−2.74
IqPH11	11	46.10 (44.65–46.95)	Chr11–19,718,068	Chr11–23,080,452	10.36	4.73	−3.06	−2.47	− 3.85	−4.11	2.79	3.99	2.57	4.15