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Table 3 QTLs for heading date and plant height in the eight-way-cross RIL population

From: Construction and integration of genetic linkage maps from three multi-parent advanced generation inter-cross populations in rice

QTLChr.Pos. (CI)a (cM)Left markerRight markerLODPVE (%)bGenotypic effectCloned gene
a1a2a3a4a5a6a7a8
qHD6.1611.10 (10.95–11.15)Chr6–1,826,585Chr6–2,336,4939.425.15−1.50−5.38− 5.72−3.26− 0.46− 2.44− 0.5319.30 
qHD6.2670.50 (70.15–70.85)Chr6–3,305,201Chr6–2,927,17142.3815.66−2.54−3.04−0.441.52−4.02−1.309.430.39Hd3a
qHD8873.40 (73.25–73.55)Chr8–4,701,356Chr8–4,892,16110.643.48−1.002.363.50−1.44−1.46−2.562.06−1.45Ghd8
qPH1.117.10 (7.05–7.15)Chr1–38,264,136Chr1–38,383,14444.816.92−4.12−7.1812.18−3.40−4.6717.53−5.99−4.34sd1
qPH1.2111.80 (11.75–11.85)Chr1–37,101,140Chr1–37,595,89536.935.92−4.84−4.2011.54−5.12−5.0616.52−2.79−6.04Psd1
qPH22129.50 (129.45–129.55)Chr2–35,144,957Chr2–26,805,01115.372.131.993.60−3.57−3.60−3.79−1.511.964.92 
qPH8821.00 (20.95–21.15)Chr8–5,727,201Chr8–6,128,1898.741.42−2.863.604.07−2.94−1.34−0.772.04−1.79 
qPH111157.00 (56.85–57.05)Chr11–22,884,317Chr11–21,254,1269.321.284.20−1.840.44−4.132.61−3.452.67−0.50 
qPH121248.40 (48.25–48.55)Chr12–21,784,888Chr12–21,468,63114.612.011.470.88−1.30−1.883.48−3.054.82−4.44 
  1. aPosition in cM and 1-LOD confidence interval (CI)
  2. bPercentage of phenotypic variance explained