Construction and integration of genetic linkage maps from three multi-parent advanced generation inter-cross populations in rice

Rice

Table 3 QTLs for heading date and plant height in the eight-way-cross RIL population

QTL	Chr.	Pos. (CI)^a (cM)	Left marker	Right marker	LOD	PVE (%)^b	Genotypic effect								Cloned gene
QTL	Chr.	Pos. (CI)^a (cM)	Left marker	Right marker	LOD	PVE (%)^b	a₁	a₂	a₃	a₄	a₅	a₆	a₇	a₈	Cloned gene
qHD6.1	6	11.10 (10.95–11.15)	Chr6–1,826,585	Chr6–2,336,493	9.42	5.15	−1.50	−5.38	− 5.72	−3.26	− 0.46	− 2.44	− 0.53	19.30
qHD6.2	6	70.50 (70.15–70.85)	Chr6–3,305,201	Chr6–2,927,171	42.38	15.66	−2.54	−3.04	−0.44	1.52	−4.02	−1.30	9.43	0.39	Hd3a
qHD8	8	73.40 (73.25–73.55)	Chr8–4,701,356	Chr8–4,892,161	10.64	3.48	−1.00	2.36	3.50	−1.44	−1.46	−2.56	2.06	−1.45	Ghd8
qPH1.1	1	7.10 (7.05–7.15)	Chr1–38,264,136	Chr1–38,383,144	44.81	6.92	−4.12	−7.18	12.18	−3.40	−4.67	17.53	−5.99	−4.34	sd1
qPH1.2	1	11.80 (11.75–11.85)	Chr1–37,101,140	Chr1–37,595,895	36.93	5.92	−4.84	−4.20	11.54	−5.12	−5.06	16.52	−2.79	−6.04	Psd1
qPH2	2	129.50 (129.45–129.55)	Chr2–35,144,957	Chr2–26,805,011	15.37	2.13	1.99	3.60	−3.57	−3.60	−3.79	−1.51	1.96	4.92
qPH8	8	21.00 (20.95–21.15)	Chr8–5,727,201	Chr8–6,128,189	8.74	1.42	−2.86	3.60	4.07	−2.94	−1.34	−0.77	2.04	−1.79
qPH11	11	57.00 (56.85–57.05)	Chr11–22,884,317	Chr11–21,254,126	9.32	1.28	4.20	−1.84	0.44	−4.13	2.61	−3.45	2.67	−0.50
qPH12	12	48.40 (48.25–48.55)	Chr12–21,784,888	Chr12–21,468,631	14.61	2.01	1.47	0.88	−1.30	−1.88	3.48	−3.05	4.82	−4.44