Rice

Table 2 Summary of the natural variation of different Pi9 allele genes in different species

From: Identification of Novel Alleles of the Rice Blast-Resistance Gene Pi9 through Sequence-Based Allele Mining

Region	π	θ	Tajima’s D
CC	0.00670	0.01475	−2.23881
NBS	0.01035	0.01574	−1.49472
LRR	0.03311	0.03529	−0.27483
Promoter	0.01401	0.01823	−0.94844
Exon1	0	0	–
Intron1	0.01499	0.01665	−0.45014
Exon2	0.02137	0.02604	−0.80967
Intron2	0	0	–
Exon3	0	0	–

Nucleotide diversity (π), Watterson’s Theta (θ), and Tajima’s D for alleles
CC Coiled-coil domain; NBS Nucleotide-binding site; LRR Leucine-rich repeats

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