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Table 1 The differentially expressed genes of transcription factors (TFs) and PPI pathway at 24 h post inoculation

From: Weighted Gene Co-Expression Network Coupled with a Critical-Time-Point Analysis during Pathogenesis for Predicting the Molecular Mechanism Underlying Blast Resistance in Rice

Group

Gene_name

Description

Comparison (Piz-t-KJ201 vs NPB-KJ201)

Categorize by function

TF

LOC_Os01g06640

Os01g0159800, basic helix-loop-helix, putative, expressed

5.01/2.17

Dof

LOC_Os01g11910

Os01g0218100, basic helix-loop-helix, putative, expressed

14.72/6.42

WRKY

LOC_Os02g14490

Os02g0241200, MYB family transcription factor, putative, expressed

0.27/1.04

B3

LOC_Os02g15350

Os02g0252400, dof zinc finger domain containing protein, putative, expressed

6.06/0

MYB

LOC_Os02g36880

Os02g0579000, no apical meristem protein, putative, expressed

4.88/1.88

ERF

LOC_Os05g03740

Os05g0128000, transcription factor TF2, putative, expressed

1.72/0.73

FAR1

LOC_Os05g50610

Os05g0583000, WRKY8, expressed

3.91/0.95

WRKY

LOC_Os08g14880

Os08g0246800, transposon protein, putative, unclassified, expressed

21.81/9.97

NAC

LOC_Os09g28440

Os09g0457900, AP2 domain containing protein, expressed

0.81/0

NAC

LOC_Os10g34884

Os10g0490300, RIPER7 - Ripening-related family protein precursor, expressed

0/0.03

bHLH

LOC_Os10g39190

Os10g0537100, B3 DNA binding domain containing protein, expressed

10.11/0.63

G2-like

LOC_Os11g02520

Os11g0117400, WRKY104, expressed

3.05/0.25

FAR1

LOC_Os11g35390

Os11g0558200, MYB family transcription factor, putative, expressed

1.78/4.70

Trihelix

LOC_Os12g03050

Os12g0123800, no apical meristem protein, putative, expressed

0.57/0.08

bHLH

PPI

LOC_Os02g41710

Os02g0627700, cyclic nucleotide-gated ion channel, putative, expressed

0.09/0.47

MAPK signaling pathway

LOC_Os02g47990

AP014958, retrotransposon protein, putative, unclassified, expressed

0.14/0.03

MAPK signaling pathway

LOC_Os04g27096

Os04g0340100, expressed protein

3.53/1.00

MAPK signaling pathway

LOC_Os06g17900

Os06g0286700, disease resistance protein RPM1, putative, expressed

35.65/0.50

MAPK signaling pathway

LOC_Os06g17920

Os06g0287000, NBS-LRR disease resistance protein, putative, expressed

10.47/0.03

WRKY DNA-binding domain containing protein, expressed

LOC_Os07g03279

Os07g0124900, SCP-like extracellular protein, expressed

51.58/15.30

OsPR1#071

LOC_Os07g03319

Os07g0125201, SCP-like extracellular protein, expressed

2.49/0.56

OsPR1#072

LOC_Os07g03368

Os07g0124900, SCP-like extracellular protein, expressed

113.56/34.77

OsPR1#072

LOC_Os07g03499

Os07g0125201, SCP-like extracellular protein, expressed

3.47/0.74

OsPR1#072

LOC_Os07g03600

Os07g0127700, SCP-like extracellular protein, expressed

1.39/0.28

OsPR1#074; PR-1a

LOC_Os07g12240

AP014963, EF hand family protein, putative, expressed

0.13/0

R protein, expressed

LOC_Os11g02520

Os11g0117400, WRKY104, expressed

3.05/0.25

R protein, expressed

LOC_Os11g11770

Os11g0224900, disease resistance protein RPM1, putative, expressed

8.44/0.25

R protein, expressed

LOC_Os11g11810

Os11g0225300, NBS-LRR disease resistance protein, putative, expressed

5.60/0

R protein, expressed

LOC_Os11g11920

Os11g0226400, resistance protein, putative, expressed

7.17/0

R protein, expressed

LOC_Os11g11990

Os11g0227100, NB-ARC domain containing protein, expressed

5.78/2.51

R protein, expressed

LOC_Os11g43700

Os11g0657900, RGH1A, putative, expressed

1.23/0.54

R protein, expressed

LOC_Os12g17430

AP014968, NBS-LRR disease resistance protein, putative, expressed

4.01/0.54

R protein, expressed