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Table 4 Locations and characteristics of QTLs detected for root dry weight (RDW) under normal and salinity conditions

From: Genome-Wide Association Study (GWAS) to Identify Salt-Tolerance QTLs Carrying Novel Candidate Genes in Rice During Early Vegetative Stage

QTL

Chromosome

No. of Associated SNPs

Position/interval (Mbp)

-Log10(p)

r2

qRDWn1.1

1

1

2.06

4.2

10.04

qRDWn6.1

6

2

3.59–3.60

4.0–4.7

10.12–11.27

qRDWn6.2

6

1

23.70

4.1

9.77

qRDWn7.1

7

1

0.92

4.1

9.82

qRDWn7.2

7

1

28.93

5.1

10.96

qRDWs1.1

1

1

23.67

4.5

7.99

qRDWs1.2

1

2

32.33–32.36

4.1–4.2

9.31–9.49

qRDWs1.3

1

30

41.12–42.98

4.0–5.4

9.57–14.37

qRDWs2.1

2

1

35.26

4.7

7.60

qRDWs4.1

4

1

4.69

4.1

8.46

qRDWs6.1

6

3

30.48–31.21

4.1–4.3

9.23–9.91

qRDWs12.1

12

1

17.53

4.6

11.26