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Table 4 Locations and characteristics of QTLs detected for root dry weight (RDW) under normal and salinity conditions

From: Genome-Wide Association Study (GWAS) to Identify Salt-Tolerance QTLs Carrying Novel Candidate Genes in Rice During Early Vegetative Stage

QTL Chromosome No. of Associated SNPs Position/interval (Mbp) -Log10(p) r2
qRDWn1.1 1 1 2.06 4.2 10.04
qRDWn6.1 6 2 3.59–3.60 4.0–4.7 10.12–11.27
qRDWn6.2 6 1 23.70 4.1 9.77
qRDWn7.1 7 1 0.92 4.1 9.82
qRDWn7.2 7 1 28.93 5.1 10.96
qRDWs1.1 1 1 23.67 4.5 7.99
qRDWs1.2 1 2 32.33–32.36 4.1–4.2 9.31–9.49
qRDWs1.3 1 30 41.12–42.98 4.0–5.4 9.57–14.37
qRDWs2.1 2 1 35.26 4.7 7.60
qRDWs4.1 4 1 4.69 4.1 8.46
qRDWs6.1 6 3 30.48–31.21 4.1–4.3 9.23–9.91
qRDWs12.1 12 1 17.53 4.6 11.26