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Table 11 Co-located QTLs associated to different traits under salinity stress

From: Genome-Wide Association Study (GWAS) to Identify Salt-Tolerance QTLs Carrying Novel Candidate Genes in Rice During Early Vegetative Stage

#

Chromosome

Position/interval (Mbp)

No. of co-located QTLs

Co-located QTLs

1

1

22.77–22.99

2

qRFW-R1.1, qRDW-R1.1

2

1

23.67–24.95

2

qRDWs1.1, qRFWs1.2

3

1

32.33–32.54

5

qRDWs1.2, qRFWs1.3, qSLs1.1, qSFWs1.1, qTWs1.1

4

1

40.79–42.98

5

qRDWs1.3, qRFWs1.4, qSFWs1.2, qSDWs1.1, qTWs1.3

5

2

30.42–30.55

2

qRFW-R2.1, qRDW-R2.1

6

2

35.26

2

qRDWs2.1, qRFWs2.1

7

6

29.76–31.21

3

qRDWs6.1, qRFWs6.3, qRLs6.1

8

7

19.66–19.83

2

qRL-R7.1, qRDW-R7.1

9

10

6.12–7.32

2

qRFWs10.1, qRLs10.1

10

11

24.96–25.85

4

qSDWs11.1, qSFWs11.1, qTWs11.1, qRWCs11.2

11

12

17.53–18.60

2

qRDWs12.1, qRFWs12.1

12

12

21.08

2

qSFWs12.1, qSLs12.1