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Table 1 Annotation of genes and phenotypes of CRISPR/Cas9 knockout mutants

From: Production Assessment and Genome Comparison Revealed High Yield Potential and Novel Specific Alleles Associated with Fertility and Yield in Neo-Tetraploid Rice

Gene ID

Gene name

Gene Annotation

Pollen fertility (%)

Seed setting (%)

Yield per plant (g)

Huaduo 1

–

–

94.45 ± 1.67

80.21 ± 1.28

14.19 ± 0.78

LOC_Os06g35900

BZR3

BES1/BZR1 homolog protein, putative, expressed

64.33 ± 7.33*

55.79 ± 4.11**

8.29 ± 1.28**

LOC_Os06g35970

NRFG2

meiosis 5, putative, expressed

72.04 ± 12.75

60.87 ± 2.42**

10.77 ± 1.22*

LOC_Os06g36010

NRFG3

plastocyanin-like domain containing protein, putative, expressed

77.97 ± 5.95*

52.09 ± 4.43**

6.66 ± 0.92**

LOC_Os06g40020

NRFG4

DEAD-box ATP-dependent RNA helicase 52A, putative, expressed

84.93 ± 1.66**

51.88 ± 3.42**

7.97 ± 1.09**

LOC_Os11g16590

CLPC3

ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplast precursor, putative, expressed

68.15 ± 11.31

57.43 ± 4.19**

11.74 ± 1.22

LOC_Os11g35090

KIN7L

kinesin motor domain containing protein, putative, expressed

37.49 ± 9.59**

35.56 ± 4.45**

5.38 ± 0.86**

LOC_Os06g36080

KIN14M

kinesin motor domain containing protein, expressed

77.81 ± 3.27*

55.91 ± 3.88**

9.48 ± 1.65*

LOC_Os06g34420

NRFG5

DEAD/DEAH box helicase domain protein, putative, expressed

54.05 ± 3.65**

67.13 ± 2.80**

11.99 ± 1.40

LOC_Os06g40030

NRFG6

S-locus-like receptor protein kinase, putative, expressed

72.92 ± 6.32*

54.58 ± 3.89**

11.59 ± 1.24

  1. Huaduo1: a neo-tetraploid rice, wild type, control; *: p-value of t-test between 0.01 and 0.05; **: p-value of t-test less than 0.01