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Table 2 Putative QTL locations for awnlessness detected in BC3F2 population between O. rufipogon W630 and O. sativa IR36

From: Evaluation of Domestication Loci Associated with Awnlessness in Cultivated Rice, Oryza sativa

Chr.LocusMarker aSource bSpikelet position cLODPV d (%)
2qAWNL2RM1211IR361st3.27.7
2nd2.25.3
3rd2.15.0
4th2.04.9
5th1.94.6
4An-1An1-DIR361st20.339.9
2nd18.937.7
3rd18.637.2
4th21.040.9
5th22.843.5
4LABA1LABA-DIR361st24.445.7
2nd35.058.4
3rd33.456.6
4th28.951.5
5th26.748.8
  1. aMarker giving high LOD by single point analysis
  2. bSource of the allele having awnlessness effect
  3. cSpikelet position of awn length data
  4. dPercentage of the phenotypic variance explained by the QTL