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Table 2 Putative QTL locations for awnlessness detected in BC3F2 population between O. rufipogon W630 and O. sativa IR36

From: Evaluation of Domestication Loci Associated with Awnlessness in Cultivated Rice, Oryza sativa

Chr. Locus Marker a Source b Spikelet position c LOD PV d (%)
2 qAWNL2 RM1211 IR36 1st 3.2 7.7
2nd 2.2 5.3
3rd 2.1 5.0
4th 2.0 4.9
5th 1.9 4.6
4 An-1 An1-D IR36 1st 20.3 39.9
2nd 18.9 37.7
3rd 18.6 37.2
4th 21.0 40.9
5th 22.8 43.5
4 LABA1 LABA-D IR36 1st 24.4 45.7
2nd 35.0 58.4
3rd 33.4 56.6
4th 28.9 51.5
5th 26.7 48.8
  1. aMarker giving high LOD by single point analysis
  2. bSource of the allele having awnlessness effect
  3. cSpikelet position of awn length data
  4. dPercentage of the phenotypic variance explained by the QTL