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Table 1 Summary of QTLs identified across different mapping populations with ICIM software

From: Identification and Characterization of a Large Effect QTL from Oryza glumaepatula Revealed Pi68(t) as Putative Candidate Gene for Rice Blast Resistance

Mapping populationPopulationPopulation sizeChrmMarker intervalsLODR2AEDE
1. INGR15002 / BPT 5204F21883RM14635(6.8) – RM14761(9.8)11.734.7−0.89−0.08
  7RM21052(3.7) – RM 1377 (12.0)8.625.5−0.830.01
F31883RM14635(6.8) – RM251(10)11.734.8−0.89−0.14
  7RM21052(3.7) – RM 1377 (12.0)8.525.4−0.83−0.02
2. INGR15002 / BPT 5204 (NE_Leaf)F21883RM14635(6.8) – RM251(10)10.928.8−1.110.33
F31883RM14635(6.8) – RM251(10)10.828.7−1.110.33
3. INGR15002 / BPT 5204 (NE_Neck)F21883RM14635(6.8) – RM251(10)9.132.7−1.07−0.16
F31883RM14635(6.8) – RM251(10)8.732.6−1.02−0.01
4. INGR15002 / CO-39F21883RM3195(4.4) – RM251(10)11.635.535.5−1.1
7RM21052(3.7) - RM1377 (12.0)5.914.914.9−0.7
5. INGR15002 / BPT5204//BPT 5204BC1F2:31883RM14635(6.8) – RM14761(9.8)9.630.7−1.080.19
7RM21052(3.7) – RM1377(12.0)7.522.8−0.98−0.02
  1. Numbers in parenthesis are the physical positions of the markers
  2. Chrm Chromosome, LOD Logarithm of Odds, AE Additive Effect, DE Dominant Effect, R2 Phenotypic Variance