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Table 5 Genotype and phenotype of IRRI new released varieties

From: The broad-spectrum rice blast resistance (R) gene Pita2 encodes a novel R protein unique from Pita

Entry NoVarietyGenotype using InDel and CAPS markersPhenotype to differential isolates
Z12F/R18729F3/R4-PvuIIPO6–6CA89BN209IK81–25M39–1–3-8-1M101–1–2-9-1BN111
 IR64DNSSRRRRR
 CO39IYSSSSSSS
 IRBLta2-Re [CO]DNSSRRRRR
PR 1NSIC Rc 216INSRRRRRS
PR 2NSIC Rc 222INSRRRRRS
PR 3NSIC Rc 224DNRRRRRRR
PR 4NSIC Rc 226INSRRRRRS
PR 5NSIC Rc 238DNRRRRRRR
PR 6NSIC Rc 240DNSRRRRRR
PR 7NSIC Rc 298INSSRRRRS
PR 8NSIC Rc 300IdSSRRSSS
PR 9NSIC Rc 302INSSSRRSR
PR 10NSIC Rc 308INSSRRRRS
PR 11NSIC Rc 352INSSRRRRS
PR 12NSIC Rc 356DNRRRRRRR
PR 13NSIC Rc 182INSRRRRRS
PR 14NSIC Rc 184INSSSRRSS
PR 15NSIC Rc 290DNSSRRRRR
PR 16NSIC Rc 294INSSRRRRS
PR 17NSIC Rc 296INSSRRRRS
PR 18NSIC Rc 324INSSRRRRS
PR 19NSIC Rc 328DNRRRRRRR
PR 20NSIC Rc 330INSRRRRRR
PR 21NSIC Rc 332DNSRRRRRR
PR 22NSIC Rc 334INRSRRRRS
PR 23NSIC Rc 336INSSRRRRR
PR 24NSIC Rc 338DNSSRRRRR
PR 25NSIC Rc 340IdSSRRRRR
PR 26NSIC Rc 392DNSSRRRRR
PR 27NSIC Rc 192IdRSSRSSR
PR 28NSIC Rc 272INRSRRRRR
PR 29NSIC Rc 274INRRRRRRR
PR 30NSIC Rc 278DNSSRRRRR
PR 31NSIC Rc 280IdSSRRRSS
PR 32NSIC Rc 282DNSSRRRRR
PR 33NSIC Rc 284INSSRRRRS
PR 34NSIC Rc 286INSSRRRRS
PR 35NSIC Rc 288IdSSRSSSR
PR 36NSIC Rc 238DNRRRRRRR
PR 37NSIC Rc 346INSSRRSRR
PR 38NSIC Rc 25INRRRRSRR
PR 39PSB Rc 18-Sub1DNSSRRRRR
PR 40NSIC Rc 21SRINSSRRRRS
PR 41NSIC Rc 218SRINSRRRRSS
PR 42NSIC Rc 220SRIYRRRRRRR
PR 43NSIC Rc 304SRIYRRRSRSR
PR 44NSIC Rc 342SRIdSSRRSSR
PR 45NSIC Rc 344SRDNSSRRRRR
PR 46Mestiso 30INRSRRRRS
  1. I: Amplicon size is 226 bp; D: Amplicon size is 214 bp; N: no cleavage site with PvuII and DNA fragment size is 812 bp; Y: containing cleavage site of PvuII and fragments’ sizes are 416 bp and 408 bp; d: containing a small deletion outside InDel region; R: resistant; S: susceptible; PO6–6 and CA89 are virulent isolates to Pita2 whereas other 5 isolates are avirulent