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Rice

Table 4 Amino acid polymorphism of Pita2 in different rice germplasm

From: The broad-spectrum rice blast resistance (R) gene Pita2 encodes a novel R protein unique from Pita

Varieties

Amino acid position

789

792

793

846

847

851

854

858

866

869

870

871

872

873

875

877

879

881

882

886

887

889

891

895

897

899

Katy

E

L

R

T

T

M

A

N

I

M

–

–

–

–

E

P

K

E

P

M

P

K

P

Y

F

V

IR64

.

.

.

.

.

.

.

.

.

.

–

–

–

–

.

.

.

.

.

.

.

.

.

.

.

.

CO39

.

.

.

.

.

.

.

.

.

K

K

P

E

K

K

A

R

.

L

.

.

.

.

.

.

.

Nipponbare

.

.

.

.

.

.

.

.

.

K

K

P

E

K

K

A

R

.

L

V

T

.

T

F

.

G

LTH

K

Q

G

A

A

V

T

K

M

K

K

P

E

E

K

A

S

A

L

.

.

Y

.

F

Y

S

IRBLkp-K60

.

.

.

.

.

.

.

.

.

K

K

P

E

K

K

A

R

.

L

V

.

.

T

F

.

G

IRBLzt-T

.

.

.

.

.

.

.

.

.

K

K

P

E

K

K

A

R

.

L

V

T

.

T

F

.

G

IRBLta-K1

.

.

.

.

.

.

.

.

.

K

K

P

E

K

K

A

R

.

L

V

T

.

.

.

.

G

IRBL19-A

.

.

.

.

.

.

.

.

.

K

K

P

E

K

K

A

R

.

L

V

.

.

T

F

.

G

  1. LTH: Lijiangxintuanheigu; IRBL: IRRI bred blast resistant line. “-” denotes deletion and “.” denotes identical to the one of Ptr in Katy (Genbank accession no.: MG385185). Pita2 haplotypes in different rice varieties were cloned and sequenced in this stud except Nipponbare containing LOC_Os12g18729
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