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Rice
Fig. 5 | Rice

Fig. 5

From: Genome-Wide Association Analysis Dissects the Genetic Basis of the Grain Carbon and Nitrogen Contents in Milled Rice

Fig. 5

Haplotype analyses for the C/N ratio and nucleotide diversity of the LOC_Os01g04360 candidate gene at qCN-1.1. a Haplotype analyses and comparisons of the mean C/N ratio vs LOC_Os01g04360 haplotypes in five rice subgroups. Each red point around each boxplot indicates the C/N ratio of one accession with the relative haplotype in its subgroup. Haplotypes in fewer than 10 accessions are not shown. b Ratio of the nucleotide diversity between modern varieties and landraces for the 600-kb genomic region flanking LOC_Os01g04360. Red and blue lines represent XI and GJ subgroups, respectively. The translucent green rectangle represents the LOC_Os01g04360 genomic region. c Frequencies of different haplotypes of LOC_Os01g04360 in XI and GJ landraces and modern varieties. d Normalized spatio-temporal expression of LOC_Os01g04360 in various Nipponbare tissues throughout the entire growth period in the field [downloaded from RiceXPro (version 3.0)]

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