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Table 1 Coverage of the reads mapping to the Nipponbare reference genome from resequencing of the indica rice variety Zhefu802 and a rice landrace CMG using Hiseq 2000.

From: Genomic and transcriptomic analysis reveal molecular basis of salinity tolerance in a novel strong salt-tolerant rice landrace Changmaogu

BMK IDClean_ReadsClean_BaseMapped (%)Properly_mapped (%)Q30(%)
CMG42,143,65512,625,063,75696.3990.3391.82
Zhefu80235,794,17010,720,972,86097.4291.6593.66
S-pool71,884,97621,536,286,33498.0191.9492.37
R-pool72,863,53021,826,349,91097.7192.0392.78