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Rice
Fig. 5 | Rice

Fig. 5

From: OsPGIP1-Mediated Resistance to Bacterial Leaf Streak in Rice is Beyond Responsive to the Polygalacturonase of Xanthomonas oryzae pv. oryzicola

Fig. 5

RNA-seq analysis of differentially expressed genes between the OsPGIP1-overexpressing line (OV-24) and ZH11 in response to RS105 inoculation. a and b Venn diagram of upregulated (a) or downregulated (b) DEGs in response to RS105 at 24 h postinoculation. DEGs were considered at P value< 0.001 and |log2-fold change| > 1. ZH11-RS vs. ZH11 and OV-24-RS vs. OV-24 represent the common DEGs identified in two experimental repeats, with noninfected ZH11 and OV-24 as controls. c Heatmap analysis of the common significantly upregulated DEGs in OV-24-RS vs. OV-24 and ZH11-RS vs. ZH11. The heatmap was classified into defense response, cell wall metabolism, transcription factors (TFs), receptor-like kinases (RLKs) and ROS metabolism. The intensity of color indicates the expression level of genes from left to right, indicating higher gene expression. d The expression of the transcription factor genes, cell wall-related genes and defense response genes that were upregulated in RNA-seq analysis was evaluated by qRT-PCR in ZH11 and OV-24. The internal control gene was ACTIN. The above experiments were repeated three times with similar results

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