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Table 1 Cold-stress responses of ethylene metabolism-related genes in tolerant rice anthers. [this table should be added immediately before Discussion]

From: Early cold stress responses in post-meiotic anthers from tolerant and sensitive rice cultivars

LOCUS IDGeneRPKM (ERY CO)RPKM (ERY CS)Reference
Ethylene synthesis
 LOC_Os03g51740OsACS11.101.88Rzewuski and Sauter, 2008
 LOC_Os04g48850OsACS20.160.24Rzewuski and Sauter, 2008
 LOC_Os05g10780OsACS32.513.22Rzewuski and Sauter, 2008
 LOC_Os05g25490OsACS40.010.02Rzewuski and Sauter, 2008
 LOC_Os01g09700OsACS50.020.00Rzewuski and Sauter, 2008
 LOC_Os06g03990OsACS620.7325.47Rzewuski and Sauter, 2008
 LOC_Os09g27820OsACO12.583.67Rzewuski and Sauter, 2008
 LOC_Os02g53180OsACO2a26.83108.39Rzewuski and Sauter, 2008
 LOC_Os09g27750OsACO31.181.09Rzewuski and Sauter, 2008
 LOC_Os11g08380OsACO4a5.8617.86Rzewuski and Sauter, 2008
 LOC_Os05g05680OsACO50.150.12Rzewuski and Sauter, 2008
 LOC_Os05g05670OsACO60.100.08Rzewuski and Sauter, 2008
 LOC_Os01g39860OsACO70.410.32Rzewuski and Sauter, 2008
Ethylene sensing
 LOC_Os03g49500OsERS179.28103.50Rzewuski and Sauter, 2008
 LOC_Os05g06320OsERS212.7717.76Rzewuski and Sauter, 2008
 LOC_Os04g08740OsETR227.7940.83Rzewuski and Sauter, 2008
 LOC_Os02g57530OsETR32.034.82Rzewuski and Sauter, 2008
 LOC_Os07g15540OsETR40.280.54Rzewuski and Sauter, 2008
 LOC_Os01g51430OsRTE114.8011.03Rzewuski and Sauter, 2008
 LOC_Os05g46240OsRTE2a13.0644.74Rzewuski and Sauter, 2008
 LOC_Os03g58520OsRTE322.4026.74Rzewuski and Sauter, 2008
Ethylene signal transduction
 LOC_Os02g32610OsCTR14.084.67Rzewuski and Sauter, 2008
 LOC_Os09g39320OsCTR217.3826.22Rzewuski and Sauter, 2008
 LOC_Os04g52140OsCTR314.0810.66Rzewuski and Sauter, 2008
 LOC_Os03g58060OsEIN539.0442.93Rzewuski and Sauter, 2008
 LOC_Os06g40360OsEBF1a31.0065.78Rzewuski and Sauter, 2008
 LOC_Os02g10700OsEBF2a85.29189.51Rzewuski and Sauter, 2008
 LOC_Os07g06130OsEIN231.8748.60Rzewuski and Sauter, 2008
 LOC_Os03g20780OsEIL10.774.21Rzewuski and Sauter, 2008
 LOC_Os07g48630OsEIL2a78.08220.30Rzewuski and Sauter, 2008
 LOC_Os09g31400OsEIL323.8233.25Rzewuski and Sauter, 2008
 LOC_Os08g39830OsEIL46.426.80Rzewuski and Sauter, 2008
 LOC_Os02g36510OsEIL50.320.07Rzewuski and Sauter, 2008
 LOC_Os04g38400OsEIL63.403.65Rzewuski and Sauter, 2008
OsERFs
 LOC_Os02g54160OsEREBP1377.98404.30Cheong et al., 2003
 LOC_Os03g08460OsEBP890.030.04Mao et al., 2006
 LOC_Os09g11460Sub1Ca4.4616.20Fukao et al., 2006
 LOC_Os12g41060SK1/SK20.030.06Hattori et al., 2009
 LOC_Os09g28440OsEATB0.301.46Qi et al., 2011
 LOC_Os02g10760OsWR1194.76180.64Wang et al., 2012
 LOC_Os08g35240OsDERF10.000.00Wan et al., 2011
 LOC_Os01g58420OsERF3a70.93284.72Wan et al., 2011
 LOC_Os04g52090OsAP2–3998.69225.31Wan et al., 2011
 LOC_Os04g46220OsERF1a4.6025.86Hu et al., 2008
Other ethylene related transcription factors (TF)
 LOC_Os02g45010OsbHLH076a9.3621.93This work
 LOC_Os07g28890OsbHLH077a14.4041.89This work
 LOC_Os07g22730OsERF136a0.194.11This work
 LOC_Os03g08500OsERF64a265.101022.77This work
 LOC_Os03g08490OsERF69a0.566.52This work
 LOC_Os05g41780OsERF74a126.50328.52This work
 LOC_Os09g39850OsERF87a0.386.54This work
 LOC_Os05g25260OsERF56a5.0416.33This work
 LOC_Os01g49830AP2/EREBP127a6.6419.14This work
 LOC_Os04g46440OsERF34a5.0024.81This work
 LOC_Os04g55520OsERF8a13.9350.32This work
 LOC_Os01g21120OsERF68a2.178.14This work
 LOC_Os07g42510OsERF65a2.649.91This work
  1. a, SSTF genes from ERY RNA-seq datasets. CO and CS, control or cold-stress treated samples, respectively