Table 1 Characterization of deduced OsPGIP2 protein
Characteristic | Predicted Results | Characteristic | Predicted Results | |
|---|---|---|---|---|
Gene ontology | Leucine-rich repeat (LRR) protein | Transmembrane helices | Extracellular | |
Number of amino acids | 342 | Subcellular location | Secretory pathway | |
Molecular weight | 36966.91 | Instability index | 40.41 | |
Theoretical pI | 4.73 | Aliphatic index | 103.33 | |
Cleavage site of signal peptide | Between 22th and 23th amino acid | Grand average of hydropathicity | 0.08 | |
Secondary structure | Alpha helix | 47.66% | Estimated half-life | 30 h (mammalian reticulocytes, in vitro) |
Extended strand | 10.23% | > 20 h (yeast, in vivo) | ||
Random coil | 42.11% | > 10 h (E. coli, in vivo) | ||
Leucine-rich nuclear export signals | LLLLLSVLLL | Solubility when overexpressed in E. coli | 0.0% | |