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Table 5 List of several important differentially expressed genes derived from W + F versus W (Wp + R vs. Wp) comparison and Cp + R versus C (Cp + R vs. C) comparison. Cp + R, Rhizoglomus intraradices-inoculated cultivated rice infected with M. oryzae; Cp, R. intraradices-uninoculated cultivated rice infected with M. oryzae; Wp + G, R. intraradices-inoculated wild rice infected with M. oryzae; Wp, R. intraradices-uninoculated wild rice infected with M. oryzae

From: Comparative study of the mycorrhizal root transcriptomes of wild and cultivated rice in response to the pathogen Magnaporthe oryzae

Gene ID

Description

RNA-sequencing data

Wp + G vs. Wp

log2(fold-change)

q-value

Cp + G vs. Cp

log2(fold-change)

q-value

Os11g0210300

α-linolenic acid metabolism-related genes

1.62

< 0.01

unchanged

 

Os06g0346300

α-linolenic acid metabolism-related genes

2.99

< 0.01

unchanged

 

Os03g0227700

brassinosteroids-related genes

−1.30

< 0.01

1.41

< 0.01

Os05g0200400

brassinosteroids-related genes

−0.61

< 0.01

0.79

< 0.01

Os04g0469800

brassinosteroids-related genes

unchanged

 

0.74

0.03

Os05g0418100

Mildew Resistance Locus O (MLO)-like proteins

1.10

< 0.01

unchanged

 

Os11g0181400

Mildew Resistance Locus O (MLO)-like proteins

1.11

< 0.01

unchanged

 

Os08g0244500

encoding 1,3-ß-glucosidases

4.36

< 0.01

unchanged

 

OS01g0713200

encoding 1,3-ß-glucosidases

2.75

< 0.01

unchanged

 

Os07g0600700

endo-1,3-ß-glucosidases

unchanged

 

1.68

< 0.01

Os09g0422500

cell wall-related genes

5.23

< 0.01

unchanged

 

Os01g0750300

cell wall-related genes

2.31

< 0.01

unchanged

 

Os01g0746700

cell wall-related genes

1.76

< 0.01

unchanged

 

Os08g0345500

cellulose synthases

−2.16

0.04

1.46

< 0.01

Os08g0160500

cellulose synthases

unchanged

 

1.20

< 0.01

Os09g0428000

cellulose synthases

unchanged

 

0.84

0.01

Os02g0218700

allene oxide synthase and lipoxygenase

0.73

0.01

−3.05

< 0.01

Os03g0738600

allene oxide synthase and lipoxygenase

1.35

0.02

unchanged

 

Os11g0256900

carboxyl methyltransferase

0.68

< 0.01

unchanged

 

Os04g0665200

carboxyl methyltransferase

2.27

< 0.01

unchanged

 

Os11g0260100

carboxyl methyltransferase

−1.04

< 0.01

1.34

< 0.01

Os01g0701700

carboxyl methyltransferase

−0.73

0.03

1.65

< 0.01

Os01g0375500

encoding a shikimate 5-dehydrogenase

2.27

0.04

unchanged

 

Os03g0118800

mevalonate pathway (MVA)-related gene

−1.73

< 0.01

unchanged

 

Os09g0492700

mevalonate pathway (MVA)-related gene

0.67

< 0.01

unchanged

 

OS07G0101000

simple phenols-related gene

1.72

0.01

unchanged

 

OS05G0458300

simple phenols-related gene

2.89

< 0.01

unchanged

 

OS02G0749700

phenols-related gene

unchanged

 

−5.05

< 0.01

OS12G0258700

phenols-related gene

unchanged

 

−2.23

0.04

Os02g0570400

terpenoid pathway-related gene

2.82

0.02

−2.77

< 0.01

Os04g0344100

terpenoid pathway-related gene

1.53

< 0.01

unchanged

 

Os02g0568700

terpenoid pathway-related gene

unchanged

 

−5.34

< 0.01

Os02g0571100

terpenoid pathway-related gene

4.96

< 0.01

−4.11

< 0.01