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Table 4 Functional KASP markers

From: Development of a core SNP arrays based on the KASP method for molecular breeding of rice

Marker Chromosome Physical location Polymorphic type Gene Trait
SK06.1765761 6 1,765,761 G/T GBSSI/Wx amylose content
SK06.1768006 6 1,768,006 A/C GBSSI/Wx amylose content
SK06.1768997 6 1,768,997 C/T GBSSI/Wx amylose content
SK06.6752887 6 6,752,887 GC/TT SSIIa/ALK gelatinization temperature
SK06.6752756 6 6,752,756 A/G SSIIa/ALK gelatinization temperature
SK08.20382857 8 20,382,857 AAAAGATTATGGC/TATAT Badh2/fgr grain fragrant
SK08.8008549 8 8,008,549 A/C fgr grain fragrant
SK08.5140824 8 5,140,824 C/T GPT1 amylose content
SK12.10607554 12 10,607,554 G/T Pita blast resistance
SK05.3340204 5 3,340,204 A/T Chalk5 chalkiness
SK10.18835485 10 18,835,485 A/C Rf4 fertility
SK11.27979265 11 27,979,265 G/T Pik blast resistance
SK06.10389729 6 10,389,729 CAGGAAT/TGTTATT Pi2 blast resistance
SK03.16733441 3 16,733,441 A/C GS3 grain length