From: Divergent evolution of rice blast resistance Pi54 locus in the genus Oryza
Species | Length (bp) | Percentage of sequence | |||
---|---|---|---|---|---|
Retroelements | DNA transposons | Unclassified | Total interspersed repeats | ||
O. meridionalis (AA) | 112,929 | 9.34% | 21.09% | 6.81% | 37.24% |
O. rufipogon (AA) | 92,702 | 13.45% | 21.07% | 18.34% | 52.86% |
Nipponbare (AA) | 98,798 | 12.73% | 21.35% | 21.56% | 55.64% |
O. brachyantha (FF) | 32,280 | 7.59% | 2.37% | 0.94% | 10.90% |
O. punctata (BB) | 22,183 | 1.58% | 1.59% | 0.00% | 3.17% |
Sasanishiki (AA) | 25,061 | 27.36% | 5.99% | 0.09% | 33.43% |
O. nivara (AA) | 25,651 | 25.92% | 5.11% | 0.63% | 31.66% |
O. glumaepatula (AA) | 22,674 | 18.87% | 5.45% | 0.10% | 24.42% |
O. barthii (AA) | 16,743 | 0.00% | 19.76% | 1.84% | 21.60% |
O. glaberrima (AA) | 26,686 | 6.76% | 39.67% | 2.13% | 48.56% |