A novel Rice QTL qOPW11 Associated with Panicle Weight Affects Panicle and Plant Architecture

Rice

Table 1 The QTLs for one panicle weight

Chr.	QTL	Peak position (cM)	Confidence interval^a (cM)	Interval marker^b	LOD		AE^c (g)		PVE^d(%)
Chr.	QTL	Peak position (cM)	Confidence interval^a (cM)	Interval marker^b	2014	2015	2014	2015	2014	2015
5	qOPW5	128.31	124.3–129.3	aa05000868-aa05001022	3.32	5.19	−0.10	−0.12	3.4	5.5
7	qOPW7	78.31	68.1–88.5	aa07001934-aa07005234	3.70	2.36^e	− 0.13	−0.08	5.6	2.9
11	qOPW11	88.81	88–90.3	aa11004506-aa11005083	37.67	36.13	0.42	0.36	55.1	51.2

^a Confidence intervals showed total length of 1-LOD support interval of detected QTLs in 2014 and 2015
^b Interval markers showed the markers on either side of confience intervals
^c Additive effect. In case of the positive AE, the trait value incresed in the Koshihikari allele
^d Phenotypic variance explained
^e No significant LOD