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Table 3 Effects of the QTL (in the interval SNP1-SNP5) on yield-related traits detected in the random subpopulation BC3F2-LQ96 derived from BC3F1-22F01 using Kongyu 131 as the recurrent parent and GKBR as the donor parent

From: Updating the elite rice variety Kongyu 131 by improving the Gn1a locus

Traits

Chr

Nearest

Additive

Dominant

LOD

Var.%

marker

effect

effect

NPB

1

SNP3

2.00

0.50

5.0

39.9%

DPB

1

SNP3

0.08

0.02

2.2

20.3%

GNP

1

SNP3

34.95

14.05

5.2

41.1%

GDP

1

SNP3

1.65

0.74

5.1

40.4%

  1. Var.% represents the percentage of total phenotypic variance explained by the QTL