Rice

Table 4 Summary of significant marker-trait associations identified for bakanae disease resistance

From: Identification of bakanae disease resistance loci in japonica rice through genome wide association study

Marker	Chr	Position (bp)	MAF	-log₁₀(p)	Average I* value
Marker	Chr	Position (bp)	MAF	-log₁₀(p)	Minor allele^a	Major allele^b
S1_628091	1	628,091	0.16	5.84	30.0	44.4
S4_31750955	4	31,750,955	0.15	6.06	48.8	41.1
S4_1212877	4	1,212,877	0.13	4.06	50.9	40.6
S6_4318697	6	4,318,697	0.37	3.89	43.1	41.5
S7_3180670	7	3,180,670	0.36	4.41	44.7	40.6
S8_19138386	8	19,138,386	0.24	3.92	46.6	40.6
S12_24321230	12	24,321,230	0.15	4.14	33.1	43.7

SNP markers passing the 0.01 FDR threshold are in bold
^aAverage I* value of the accessions carrying the allele at lower frequency
^bAverage I* value of the accessions carrying the allele at higher frequency

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